Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04067 ATGATGAAGTGCATTAAAGGTATCATTAGTAGTTTCATTTTGGTTATGATTATTTTCTCTATGAATGAAAAGTACTGTTATGgacaacaagaacaagaagaagaccCTTCTTCTTCTGATGTAACTCCAATGGAGAAAACAGAGTTGAATGCTCTGTATTCTGCAATTCAAGGCTTTGTTGGTAATTCATGGAATGGCTCATATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGGAGTTTCTTGTGATATTTTCAATGGACTTTGGTATGTAACAGTAATCAACATTGGACCTATTCATGAAAATTCACTTGTTTGTGCTAATGAAAATTTGGAATTTAAACAAGAATTATTTCAGCTTAAGCATCTTAAAGTTCTATCATTCTTCAACTGTTTTCAATCACCAACTAGTCTTCCGGTTTCAATTCCGACTAAAAATTGGGAGAATCTTGCTGAAAACGTAGAATCCATAGAATTTAGATCAAATCCTGGTCTCGTCGGTAACATTCCTTCGACTTTTGGTTTACTCAAGAATCTTCAATCATTAGTAGTACTAGAAAATGGTTTATCAGGTAAAATTCCACAAGAAATTGGAAATCTTGTGAAATTGAAGAGATTAGTTCTTTCTGGAAACAATTTTAGTGGTAATATTCCAGATGTTTTTGGAGGGTTAAGTGATTTATTAATCCTTGATTTAAGCAGAAATTCATTATCTGGAAATTTGCCTATATCAATTGGAAGATTAATTTCAGCATTGAAGATTGATTTGAGTCATAATTATCTTGAAGGGAAGTTGCTTAATGAATTTGGTAATCTTAAGAATTTGACACTTATGGATTTAAGGAATAATAGATTATGTTGTGGATTGGTTTTATCTTTACAAGAAATGAATTCATTGGAAGAAATGGTTTTATCAAATAATCCATTAGGTGGTGATATAAGGCTATTAAATTGgaaaaatcttcaaaatttagtgattttagAACTCTCTAACATGAATTTGAGTGGTGAAATTCCTGAGTCTTTATtagaattgaagaaattgaGATTTTTGGGACTTAATGATAACAATCTTACAGGTAAAGTGTTACCAAAGCTAGAATCACTTCCTTCTCTCAATGCACTTTACTTAAGTGGAAATAATTTTAAAGGAGAAATTCAATTTTCACAAGGGTTTTTTGGTAAATTGGGAAGACGTTTTGGTGCTTGGAGTAATCCTAAACTTTGCTATCAAGTTGGAGTAATGTCAACAAAAAATGTTCCTTATGGAGTAAAGCCATGTCATCAAGAAGAAGAGGTTCATTTGGTAAAATCAAATGCCAAAAATGAGATGATAATCAATGGTGATATGAACCATAATTCCAATTTCATAGCCTCTATGGGATTTTCTAGTTCTACCACTAGTGGAAATTTCTGGTGGGTTTTTATGATTTTGGGTTTAGtatatagtttttaa 1461 0.3032 MMKCIKGIISSFILVMIIFSMNEKYCYGQQEQEEDPSSSDVTPMEKTELNALYSAIQGFVGNSWNGSYLYPDPCGWTPIQGVSCDIFNGLWYVTVINIGPIHENSLVCANENLEFKQELFQLKHLKVLSFFNCFQSPTSLPVSIPTKNWENLAENVESIEFRSNPGLVGNIPSTFGLLKNLQSLVVLENGLSGKIPQEIGNLVKLKRLVLSGNNFSGNIPDVFGGLSDLLILDLSRNSLSGNLPISIGRLISALKIDLSHNYLEGKLLNEFGNLKNLTLMDLRNNRLCCGLVLSLQEMNSLEEMVLSNNPLGGDIRLLNWKNLQNLVILELSNMNLSGEIPESLLELKKLRFLGLNDNNLTGKVLPKLESLPSLNALYLSGNNFKGEIQFSQGFFGKLGRRFGAWSNPKLCYQVGVMSTKNVPYGVKPCHQEEEVHLVKSNAKNEMIINGDMNHNSNFIASMGFSSSTTSGNFWWVFMILGLVYSF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04067 486 Gene3D Ribonuclease Inhibitor 45 317 IPR032675 -
Tsu01g04067 486 PANTHER PIRIFORMOSPORA INDICA-INSENSITIVE PROTEIN 2-LIKE 10 480 - -
Tsu01g04067 486 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 480 - -
Tsu01g04067 486 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Tsu01g04067 486 SUPERFAMILY L domain-like 44 388 - -
Tsu01g04067 486 Gene3D Ribonuclease Inhibitor 318 395 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04067 113 398 Receptor kinase-like Gene Family AT2G15080 30.000 2.38e-20 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04067 01 48553504 48556317 Tsu01g04067 01 48553504 48556317 ECH