Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04064 ATGGTGTTGCATTTTACAAAATTGCGGCACAAGACTGCAACAACGTGGAACTTTGATTTTCTAACTTCTCCATTTGCACGGCACATACTCATTGAGACGTTAGGACTTCTTATAGCTGCTTCAATTGCAGCCTATAAATTTCAGCAGAATGTGAATGGATCAAAATTAGGTACTTGTGAACATGGCGAAGCAAGGAATATGAAACTTCAAGATGAGGGCACAGAAGAGATGCAGTCCACTTGTTCTACTAATGGTGTCAACCAGAAAGTGAGGGAAGTGGAAGAGCAAGAAGAGGAGGTTAAGTTAATTAGCAgcataataaatctagctaatgATTTTGACGATGAAATTCTATCTGAATTTGAAAGCCTTCTATCTGAGCAGATTGATTTTCCGTTACTTGCTGACAAGACCAATGGGGCCAAGAAAGACGGAGATAACGAAACAGAATCAGCAAAAACTGGTTGTGAATTAGAACGGTTGCGGAATGTAGTCGAGGAACTAGAGGAGAGGGAAGTGAAACTTGAAAGTGAATTGCTCGAGTATTATGGTTTGAAAGAGCAGGTACCAGACATCGAGGAGTTACAAAGGCAGTTGAGAATTAAAACTGTTGAAATCGATATGCTTCATATGACCATTAAGTCCTTGGAGGAAGAGAACACTAAACTTCAAGGAGAGCTCACATGCGGAGCTTCAGCAAATAGAGAACTTGAGGCTGCTAGAAATAAGATCGAGGAGCTGCAAAGGCAGATACGCATTGCTGCTAACCAGACAAAAGGCCAGTTGCTGTTGCTTAAACAAAAAGTTTCTGGTCtacaaagaaaagaagaagaggcTGCGAAAAAAGATGCTGAGATcgaaaagaaattgaaaaatgtgAATGATTTAGAAGTTGAAGTTGTGGAGCTTaagagaagaaataaagaaCTTCAACACAAGAAGCGAGATTTAACTGTTAAACTTAATGCTGCCGAGTCTAGAATTGCAGAACACTGCAGTATGACAGAGAATGAAATAGTCGCCAAGGCGAACACAGAAGTTGGAAGGCTAAGGCATGCTAATGAAGACCTGCAAAAGCAAGTGGAAGGACTTCAGATGAATAGGTTCAGCGAAGTTGAAGAGCTTGTATACCTTCGCTGGGTTAATGCATGCTTGAGATATGAACTCAGGAATTACAAGGCACCTTCAGGAAAATCATTGGCTCGTGATCTAAACAACAGTTTCAACCCGAAATCACAAGAGAAAGCTAAACAGCTAATGTTAGAATATGCCGGAGCAGAGCACGGGCAATGTGATACTGATCTTGAAAGCAACTTCTCCCATGATCATTCTTCACCAGGCAGTGAAGATGTTGACAGTGCATATATCAATAGCCCTACTTACAAATATTGTAATCTTAGCAAGAAAACTAGCTTAATCCAAAAGTTGAAGAAATGGAATAAAAACAAAGATGATTCAAGTGCTCATTCATCACCAGCTAGATCTCTTTCAATAGGCTCTCCTTGCAGGGTAAGTACGAGCTATAGACCAAGGAATACACTTGAATCCTTGATGCTAAAGAATGCTCATGATGCTGTAGCGATCACTACCTTCGGACAGAAGGAACATGGACCTATTCATTCTCCTGAAACTCCATCTCTTCCAAGCTTGAGAAAAGTTTCACCGAGTGATGACATTCTGGATTCTGTTTCGGCTTCATTCCAATTGATGTCTAAGTCAGTTGACAGGTCTATGGATGAAAAATATCCTGCATATAAAGATCTTCATAAATTGGCATTAGCAAGGGAGAAACAACTTAAGGATAAGGCTGAGAAAGCGAGAGAGAAGAAGTTTGGCGACATTTCAAATCTTGATGTGACCGAGGCAGAACAAGAGAGATCGATATCTTTGCAACCAAAACTCACTCAAGTATATGAGAAGGATCAGTCTGAAGATGGTAAGAATTTTGATAATCAAACCATTAACAAGATGAAGCTTTTCGAAATTAAGAAAAGGCCTCCAAGGGTGCCTCGGCCACCACCTAACCCATCTGACGGTGCTTCAGTTCCAAATTCTTCCAATGGAATACCATATGTTCCATCTGTACCTCCGCCgccgccaccaccaccaccaccaagaAGTTTACCAAAAGGATCAGTAGTTGATGACCAAGTTAAAAGGGCTCCTGAGCTTGttgaattttatcaaacattgaTGAAATGGGAAGCAAAGAAGGATACCTCATCACTAACTTCTTCGACAAGTAATTCAGCTGATGCCAGAAGCAACATGATTGGGGAAATTGAGAATAGATCAACATTTCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAACGGAAGTTCGAGCAGCCTCTTTTTCCAGGATTGAAGATGTAGTCGCTTTTGTGAACTGGCTAGATGAAGAACTCTCCTTCTTGGTTGATGAACGAGCTGTTCTCAAGCACTTCGATTGGCCTGAAGGGAAATCAGATGCACTACGAGAAGCATCTTTTGAATATCAGGATCTGATGAAATTGGGGAAGCAAGTCTCCACTTTCACCGATGATCCAAAACTCCCATGTGATGTTGCTTTGCAGAATATGTACTCATTGCTTGAAAAAGTAGAGCAAAGTGTATATGCACTTTTACGGACAAGAGATTTCGCCATTTCACGGTACAAGGAGTTTGGATTACCAGTAAATTGGCTATTAGATTCGGGAGTTGTGGGAAAGATCAAGCTTTCTTCTGTTCAACTGGCAAACATGTATATGAAGCGTATTGCATCTGAACTTGATATACTATCTGGACCCGAAAATGAACCGACAAGAGAGTTTTTAATTCTGCAAGGTGTGCGCTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGCTTTGATACAGAGAGCATGAAAGCTTTTGAAGAACTAAGAAACAGAATTCATGATCAAGCAAGTGAACATAATAATAAACAAGAAACGACGACGACAGAGGTTGATcattaa 3003 0.3906 MVLHFTKLRHKTATTWNFDFLTSPFARHILIETLGLLIAASIAAYKFQQNVNGSKLGTCEHGEARNMKLQDEGTEEMQSTCSTNGVNQKVREVEEQEEEVKLISSIINLANDFDDEILSEFESLLSEQIDFPLLADKTNGAKKDGDNETESAKTGCELERLRNVVEELEEREVKLESELLEYYGLKEQVPDIEELQRQLRIKTVEIDMLHMTIKSLEEENTKLQGELTCGASANRELEAARNKIEELQRQIRIAANQTKGQLLLLKQKVSGLQRKEEEAAKKDAEIEKKLKNVNDLEVEVVELKRRNKELQHKKRDLTVKLNAAESRIAEHCSMTENEIVAKANTEVGRLRHANEDLQKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYKAPSGKSLARDLNNSFNPKSQEKAKQLMLEYAGAEHGQCDTDLESNFSHDHSSPGSEDVDSAYINSPTYKYCNLSKKTSLIQKLKKWNKNKDDSSAHSSPARSLSIGSPCRVSTSYRPRNTLESLMLKNAHDAVAITTFGQKEHGPIHSPETPSLPSLRKVSPSDDILDSVSASFQLMSKSVDRSMDEKYPAYKDLHKLALAREKQLKDKAEKAREKKFGDISNLDVTEAEQERSISLQPKLTQVYEKDQSEDGKNFDNQTINKMKLFEIKKRPPRVPRPPPNPSDGASVPNSSNGIPYVPSVPPPPPPPPPPRSLPKGSVVDDQVKRAPELVEFYQTLMKWEAKKDTSSLTSSTSNSADARSNMIGEIENRSTFLLAVKADVETQGDFVMSLATEVRAASFSRIEDVVAFVNWLDEELSFLVDERAVLKHFDWPEGKSDALREASFEYQDLMKLGKQVSTFTDDPKLPCDVALQNMYSLLEKVEQSVYALLRTRDFAISRYKEFGLPVNWLLDSGVVGKIKLSSVQLANMYMKRIASELDILSGPENEPTREFLILQGVRFAFRVHQFAGGFDTESMKAFEELRNRIHDQASEHNNKQETTTTEVDH 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04064 1000 Coils Coil 206 226 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 534 555 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 633 714 - -
Tsu01g04064 1000 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 31 991 IPR040265 -
Tsu01g04064 1000 Coils Coil 272 327 - -
Tsu01g04064 1000 Coils Coil 589 609 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 432 452 - -
Tsu01g04064 1000 Coils Coil 230 257 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 434 448 - -
Tsu01g04064 1000 Coils Coil 340 367 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 690 709 - -
Tsu01g04064 1000 Coils Coil 973 993 - -
Tsu01g04064 1000 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 31 991 - -
Tsu01g04064 1000 Coils Coil 151 185 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 489 504 - -
Tsu01g04064 1000 MobiDBLite consensus disorder prediction 480 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04064 Tsu-Chr1 48511401 48516966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04064 01 48511401 48516966 Tsu01g04064 01 48511401 48516966 ECH