Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g04052 ATGATTCCAATTCTTCCCCATTTCTTCTTCACCTTCTTAATCTTATCCATCATCACTACTACCATCTCCACCTCATCTCCCCCGCCTTTTCCATACGGTAATTTAACCTCCTACCACATTAACTGTGGCACATCAACTAACACAACTGACCACTTCAACACAACATGGCTCTCCGACCGTTACTACACCGGCGGCTCAACCTCCGTCGTCTCTGAGCCTCTCCGATTCAACCTCCCATCGGAAAAAACTCTCCGCTACTTCCCTTCATCTTCCAACGGCAAAAAAAACTGCTACTCTTTCCCCTCTCTTCCCTCTTCTCGTTACCTTCTTCGTACTTTCACCGTCTACGATAACTACGACGATAAGTCTCGTCCTCCTTCCTTCGATGTTGCAATCTCCGGCACCATCATTTTCAACTGGCGTTCTCCCTGGCCTGAATCGACTGCTCGCGACGGTGCTTATTCTGATCTCTTTGCCTTTCTCGCTACTTCTACCGCCGATCTTTGCTTTTACGGTTTCGCTACTGATGCTCCGATTGTATCTTCAATCGAGCTTGTTCCTGTTGATTCTGCTTCATACGATTCTCTCTCCACCGGAGAAAATGTTATTCTCGTTAACTACGGTAGAATTTCATGCGGCTCCGACGAACATTTCGGTCCCGGTTTCACCAATGATACTGACAAATTCGGCCGGTCATGGCAACCGGACGAACCATTCCGAACTGGATCGGACTTAGCTTTTCGAGTTTTGTTAACGGAGAGTACCGTTAACGGCACTGATAAAGAACCAAATTATTTTCCGATGAAGCTTTATCAAACGGCTGTGACGTCGGAGGAGAATGAATTGGAGTACGAATTGAGTGTGGATGCGAAGATGGACTATATGGTGTGGCTGCATTTTGCTGAAATTGATTCTAGTGTGAAAGAAGCTGGAGAGAGAGTGTTTGATGTGTTGATCAATGGAAATAATGTAACAAGAGTTGATATATATAAAGAAGTGGGAAGTTTTACTGCTTTTTCTTGGCATTATACTGTTAGAAACTTGAGCAGTAATGTTTTGGGGATTAAGCTTGTAGCTGTTTCTGGTGCTCCTTTGATTTGTGGTTTTGAGAATTATGCACTGGTGCCTAATGAACCTTCAACTCACCCTCTTCAAGTAAGTGCAATGAAGGCATTGAAAGAATCGCTTCGTGTTCCGGGTAGAATGGGATGGAATGGTGATCCTTGTGCTCCTACAACTTGGGATGCTTGGGAAGGTGTTACCTGCCGTATGAGTGACGATAAAACTGCTCTCCTTATTACTGAAATAAATCTTGGCAGTCAAGGCTTAAAAGGGAATATCAGTGACCAGATTAGTCTTTTATCAGACTTGGTAATCCTGAACTTGACTTCTAATTCCTTGGGAGGCGCACTACCATCAGGATTAGGTCAAAAATCTCTGATTCAAGTGGATTTATCCAACAATCAGTTAACCGGCTCTATACCTGACAGTTTGGCATCTTCAAATCTGCAGCTTGTGCTATTGAATGATAACCTATTGGAAGGACGAGTGCCAGAGCAACTTTATTCTGTTGGCGTGCATGGTGGAGCTATTGAtCTCTCTGGCAACAAGGGTTTGTGCGGTGTACCATCTCTACCATCGTGTCCTATGTTTTGGGAGCATGGCAGATTATCGAGCGCGGGTAAAATTGCAATAGGCttgtcatgtttttttgttttctgtgTGGTACTGCTGCTGGTATATATCTACATCAGAAGGAAAAGGAACGATTATGACTTTGGTCTACCCCAAGAAATAATGGCTCTAGCGGCGAAGAGAAACAAATATCAGAGGCAGAAATCGTTGATGCTTCTTGAGCTGGAGAGTCAACACGCTAGGGGATTTCCTTCACCTTTTACTCCGCAATAA 1908 0.4376 MIPILPHFFFTFLILSIITTTISTSSPPPFPYGNLTSYHINCGTSTNTTDHFNTTWLSDRYYTGGSTSVVSEPLRFNLPSEKTLRYFPSSSNGKKNCYSFPSLPSSRYLLRTFTVYDNYDDKSRPPSFDVAISGTIIFNWRSPWPESTARDGAYSDLFAFLATSTADLCFYGFATDAPIVSSIELVPVDSASYDSLSTGENVILVNYGRISCGSDEHFGPGFTNDTDKFGRSWQPDEPFRTGSDLAFRVLLTESTVNGTDKEPNYFPMKLYQTAVTSEENELEYELSVDAKMDYMVWLHFAEIDSSVKEAGERVFDVLINGNNVTRVDIYKEVGSFTAFSWHYTVRNLSSNVLGIKLVAVSGAPLICGFENYALVPNEPSTHPLQVSAMKALKESLRVPGRMGWNGDPCAPTTWDAWEGVTCRMSDDKTALLITEINLGSQGLKGNISDQISLLSDLVILNLTSNSLGGALPSGLGQKSLIQVDLSNNQLTGSIPDSLASSNLQLVLLNDNLLEGRVPEQLYSVGVHGGAIDLSGNKGLCGVPSLPSCPMFWEHGRLSSAGKIAIGLSCFFVFCVVLLLVYIYIRRKRNDYDFGLPQEIMALAAKRNKYQRQKSLMLLELESQHARGFPSPFTPQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g04052 635 SUPERFAMILY L domain-like 385 523 - -
Tsu01g04052 635 Gene3D Ribonuclease Inhibitor 385 549 IPR032675 -
Tsu01g04052 635 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 5 635 - -
Tsu01g04052 635 Gene3D - 34 188 - -
Tsu01g04052 635 Gene3D - 207 372 - -
Tsu01g04052 635 Pfam Malectin-like domain 40 373 IPR024788 -
Tsu01g04052 635 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 5 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g04052 Tsu-Chr1 48369312 48374980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g04052 40 498 Receptor kinase-like Gene Family AT1G51790 28.008 8.80e-35 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g04052 01 48369312 48374980 Tsu01g04052 01 48369312 48374980 ECH