Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03922 ATGGTATGTCAAGGGTTTACTTCAAATGGGGCCAAACCTTCATTGGTCATCTTTGCCATAGCTTTATCTCTACTCATATTAACACTCACTTTTGTTCATTTTGAGTGGTTTTCAACTATACTAAATGGAAGAGATCAAAATGTCACAACAGAAGATTTTTCATCAAGGGAAATCACATGTAAAGGGTTGCAAACCAAGAATTTTACAGAATCATATGTTGGTTCAAAAAACAGTTCATCGCCATCAACAGAAAGTCATGCCGACAAACTCCTTGATGGGCTTTTCTCTTCTGAATTTGACAAAGGATCATGCTTAAGCAGATTTCAAGCTTACTTATACCGGAAGGTATCGCCTCATAAACCTTCTCCGTATCTCATATCGAAACTTCGTAGCTATGAAAATCTACACAGAAGATGTGGACCTCATAGTAAAGCTTACAATAGAACCATGGTAAAGCTCAAAAGATTCAAATCCAATAAATCTGATACTACTGGATCATGTAAGTACATAGTATGGACAGCTGCTAATGGCTTAGGAAACAGAATGGTGAGCATGGCTTCAATATTCCTATATGCAATCCTCACCGATCGAGTCCTACTAGTAGAGTTTCGTGATGACATGGTTGGCCTATTTTGTGAACCATTCCCTAATTCATCATGGATATTGCCTAAAGATTTTCCTTTTAGTGACAACAGAAAAGTTGAAATATATGAAAGCATGCTAAAAAAGGACAAGGAAAACACTTCAAAGAAGTTACTATTACCATCGACGATAGGAGTACGTCTCAATATGTATCAACAtgaacatgaattttttttctcttgtgaTCATAACCAACATCTTCTACATAAAGTACCTCTCTTGATTATAACCTCAGATCAATATTTTGTACCTGCTCTTTTTATGGTTCCATCATTTAACCAAGAGCTTAACAAAATGTTCCCAAACAAAGATACGGTTTTTCATCATTTGGGACGTTACCTATTTCTCCCTTCAAACGATGTATGGGGACCGATCAAAAGATTCTACCGAGCATATTTAGCCAGGGCAGATGAGAAGATTGGAATCCAAATAAGAGTATTTCATCCTAATCTAACACGATATGAAACAATCATGGGTCAAGTTTTGAAATGCACTCAAAATCATACGATACTACCTGGTTTCGCCACAAATATTTCAAAAGACCCTCCATTGAAAAATCAGATTTTGAAGTCTGTTTTGGTAACATCATTATATCCACAATATGGTGAGAATCTTAAGACTATGTATTTGAATAAACCAACTGTTAGAGATGAAATCATAGGAGTTTATCAGCCAAGTCATGAAGATCATCAAAAATTTGGTGATAACTTGCACAACAAGAAAGCATTGACAGACATATATCTATTAAGTTTGTGTGATGTTTTGGTTACTAGCTCATCATCAACTTTTGGGTATGTGGCTCAGAGTTTGGGAGGCATAAATCCATTGGTTCTTAAAAAATTACGAGACAACGACATCCCGGATTCGCCTTGTATGCAAGATTTCTCTATGGAGCCTTGTTTTCATATAACTCCTAAACTTGATTGCATGGAAAAACCCATAGATCATATGGGCACAATGTTTCCTTACATGAAGAAATGTGTTGATTATAAAAGGGGTGTCAAGTTGGTCAATGATATTCTATAG 1668 0.3555 MVCQGFTSNGAKPSLVIFAIALSLLILTLTFVHFEWFSTILNGRDQNVTTEDFSSREITCKGLQTKNFTESYVGSKNSSSPSTESHADKLLDGLFSSEFDKGSCLSRFQAYLYRKVSPHKPSPYLISKLRSYENLHRRCGPHSKAYNRTMVKLKRFKSNKSDTTGSCKYIVWTAANGLGNRMVSMASIFLYAILTDRVLLVEFRDDMVGLFCEPFPNSSWILPKDFPFSDNRKVEIYESMLKKDKENTSKKLLLPSTIGVRLNMYQHEHEFFFSCDHNQHLLHKVPLLIITSDQYFVPALFMVPSFNQELNKMFPNKDTVFHHLGRYLFLPSNDVWGPIKRFYRAYLARADEKIGIQIRVFHPNLTRYETIMGQVLKCTQNHTILPGFATNISKDPPLKNQILKSVLVTSLYPQYGENLKTMYLNKPTVRDEIIGVYQPSHEDHQKFGDNLHNKKALTDIYLLSLCDVLVTSSSSTFGYVAQSLGGINPLVLKKLRDNDIPDSPCMQDFSMEPCFHITPKLDCMEKPIDHMGTMFPYMKKCVDYKRGVKLVNDIL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03922 555 Coils Coil 555 555 - -
Tsu01g03922 555 Pfam Xyloglucan fucosyltransferase 75 523 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tsu01g03922 555 Gene3D - 164 240 - -
Tsu01g03922 555 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 16 553 - -
Tsu01g03922 555 PANTHER FUCOSYLTRANSFERASE 2-RELATED 16 553 IPR004938 GO:0008107|GO:0016020|GO:0042546
Tsu01g03922 555 Gene3D - 338 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03922 Tsu-Chr1 46874146 46876122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03922 67 551 Xyloglucan Fucosyltransferase1 AT2G03220 48.065 6.71e-158 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03922 K13681 - gmx:100809919 545.814