Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01320 ATGGTTTTCATAATTATTCATTCCTTGAGATCCAAGAAACAGCATGGCCTAATCAGTTGGCCTATCTTTGGAATGCTACCTGCATTACTCATTGGACTCAAAACCAGCAACATGTATGAAAGGCTCACTGATATACTTAAACAACAAAATGGAACCTTTAAATTCAAAGGACCATGGTTCACTAGTCTTAACCTTGTAGTAACCTCGGAACCGCGGAATGTAGAACATCTTCTCAAAACAAGGTTCACTAATTTCCCTAAAGGAAACTTTGTTAAAGACACAGTTTCTGATTTACTAGGAGACGGTATTTTCGCTGTAGATAATGAAACATGgcagaaacaaagaaaaacagcGAGTATCGAGTTTCATTCAACAAAGTTTAGGAAATTAACAATTGAGTCATTGTTTGAGCTTGTGAATAATAGACTTATACCTGTCTTAGATTCATCTTTGAAGAAATCGGTTTCGATCGATCTTCAAGATATTTTGTTGAGATTAACTTTTGATAATGTTTGTATGATTGCTTTTGGTGTTGATCCTGGTTGTTTACAACCTCATTTACCTGTAATACCTTTTGCAGCAGCTTTTGAGGATGCAACAGAAGCTATTTTGCTTCGATTTCCGTCGCTGGCTTGTGTATGGAAAACTATGAGGTTTCTTAACTTAGGTATGGAAAGAAAGTTGAAGAAATCAATACAAAAAGTTGATGAATTTGCTGACAATGTCATaagtgaaagaaagaaagaactaTCTTTGGAAAATGAAcatgatgacgatgatgataCGCGAAAATCAGATTTGTTAACTGTGTTTATGAGGCTTAAAGATGAGAATGGAATGGCTTATTCAGATAAGTTCTTGAGGGATATATGTGTGAATTTTATATTAGCTGGGAGAGATACTTCTTCTGTTGCTTTAAGCTGGTTTTTCTGGTTGATAGATCAGAATCATGAAGTGGAGGAGAGAATATTAGAAGAGATTTGTAGGGTTGTGAGTGAGAGAGAGGAGATTAAGAAGGAAGAATTTGACAATAATTGTTTGAGATTCTTGCCTGAGGAGATTAAGAAAATGGATTATTTGCATGCTGCTCTTTCAGAAGCTCTTAGATTGTATCCTTCTGTGCCTATGGACCATAAGGAGgtGGTAGAAGATGATACATTCCCAGATGGAACAAAACTAAAGAAAGGAACAAAAGTGATATATGCAATATATTCAATGGGAAGAATGGAAAGCATATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAAAGATGGTTAACTAAAGAAGGTAATTTCATGAGTGAATCTGCCTACAAATTCACTGCTTTTAATGGAGGACCAAGATTGTGTTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGTTGCAGCTAGCATTATATTTCATTACCATGTTAAGGTTGTTGAAAATCACCCTATTATTCCTAAGCTTTCTTTGACACTTTATATGAAGTATGGATTGAAAGTTAATCTTCATAGGCGTTGTGATGAAGAGATTGGTAAATATTTGAAGTTTAGTTAG 1545 0.3366 MVFIIIHSLRSKKQHGLISWPIFGMLPALLIGLKTSNMYERLTDILKQQNGTFKFKGPWFTSLNLVVTSEPRNVEHLLKTRFTNFPKGNFVKDTVSDLLGDGIFAVDNETWQKQRKTASIEFHSTKFRKLTIESLFELVNNRLIPVLDSSLKKSVSIDLQDILLRLTFDNVCMIAFGVDPGCLQPHLPVIPFAAAFEDATEAILLRFPSLACVWKTMRFLNLGMERKLKKSIQKVDEFADNVISERKKELSLENEHDDDDDTRKSDLLTVFMRLKDENGMAYSDKFLRDICVNFILAGRDTSSVALSWFFWLIDQNHEVEERILEEICRVVSEREEIKKEEFDNNCLRFLPEEIKKMDYLHAALSEALRLYPSVPMDHKEVVEDDTFPDGTKLKKGTKVIYAIYSMGRMESIWGKDCLEFKPERWLTKEGNFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIFHYHVKVVENHPIIPKLSLTLYMKYGLKVNLHRRCDEEIGKYLKFS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01320 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS E-class P450 group I signature 12 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 Gene3D Cytochrome P450 12 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Tsu01g01320 514 SUPERFAMILY Cytochrome P450 18 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PANTHER CYTOCHROME P450 2 504 - -
Tsu01g01320 514 PANTHER CYTOCHROME P450 86B1-LIKE 2 504 - -
Tsu01g01320 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g01320 514 Pfam Cytochrome P450 20 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01320 Tsu-Chr1 12521397 12523548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g01320 2 510 Cytochrome P450 AT5G23190 68.566 0.0 726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01320 01 12521397 12523548 Tsu01g01320 01 12521397 12523548 ECH