Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01317 ATGCCTCCGTCACGCCGACGTGGAGCAAACAAAGCCAAAGCCAATGCACATTTGAAACTCGGCGATCTCGTTCTAGCTAAGGTTAAAGGATTCCCGGCTTGGCCTGCCAAAATAAGCAGGCCAGAAGATTGGGAGAAAACCCCGGATCCGaagaaattttttgttcaattttttgggACCCAAGAAATAGCTTTTGTTGTCCCTGCGGATATTCAGGCATTCACCAGTGAGGTCAAAACTAAGTTGACTGCTCGGTGTCATGGTAAGACGAAGTGCTTTACTCAAGCTGTCAGGGAAATCTGTGCAGCATATGATGAGTTAGAGAAACAGAAAGTCGGTGGTTTGACAGATGACACTGGTGATGCACGTGCCCCTTCTTTTGATGGGGCAGTGGGTGACATAAAGGATGCTACTGATGATGTGGTATTAAATGTAGAAAAATCTAAGACTATTATGGAAGATGTTAGCACAAATTTGGAGCACTATAAACAAAGATGTGGAGAAAGGGATGACCAAGATGATAAACCGTCTGCATCTGGCCGTCCAACTGACAGTTCATCTCCAGTTTTGTCACCTGTGTTAGAACGTAAATCTTCCGTTGGTACAGAACTAAACAAGCACACTATCAGATCTGACCTTGAGGATAAATCATGTCTTAAAAAGGAAGTTTCTGATTGTAAGGATGTATGCGATGTTGAAGACTTCAAGCAAGCTAATAATGTGCAGAGTGTTTCAATCGATGGGAACAAGGCAAGAAAGCTTGTTACCGGCTCAAGGAGGAGAAGTGAAGCTGCAGCGGATAAAGAAATAAGTGGATTTAATATAGCACTTTCAAAGGGTGAAAATTCTGGAGAAACAGTGAAACGTgggaaaaaagttaaaaatgcattttttgtcGATTCTGCAGATTCTTCTAAATCAGGCCCTGATATTAACAGTggaaataaagataaaaacttGCTGAAAGCTAAAACAAGGCTCAAGGTAAAGAGTGAGTTGCAGGAGAAATTTGTTGATTCTAAGGAGGCCGATAGAAATAattcttttaagaaaaacaaGACCCAAGTTCAAGGAAAGCGTAAGTTGGGAATGAATGAAACTTTACATGCTACCAAGAAGTTCAAGCGTATGGATGCCAAAGATAAAGAACCTTTACAATCTCTCCCTGAAGATATGAAGAGCGCTTCACCTGGCTTTCCTGTTGTTGATGACAAGGCATTGAAAAAATCAGAGTTGAAAAGGTCTTTATCATGTTTGAAAACAGAGAAAGGGTTGTCATCAAGGGCTCAGACTGCTATTGCAGATTCCGATAATTCTGTTTGTGAAGTGCTGAGTGGTACAAAACATCACAGCCAAGTACGGAGGAGACGCAGACCTGTTTTCCtcattgatgatgatgatgatgatgaagaatccAAGACTCCTATTCATGGAGGGgattctaaaaatattaaatcaccCTCTCTTGTTTCAGAGCCTGTAAAGAGCAATGATCCATCGTTAGAGAATGGTGATGTTTCTCAGCTGACTAAGGGGAAACCTAGTGCACTTGAGGATAGTCATTTGAATGCACACTTAACTAAATTATGCGATGACTCTTTGCCTACAGAACATCCTCAAAAAGAGAATGCTGATGAAGTTGTTGCTGTCAATTCAACTCACATCCCTGAGCAATTAGATCCAAAGCTTTTTCCTTCGAACGTGGAAAAATTATGCTCCATCTCTCCAGTAAATTCTCCTCAGTCTCTTCCTACAACAAAGTCAAATGCCAAGCGACATAAATCTTCTAAAGCTTTGCCTGAAGTTTTGAGTAATGCTACTCAAAAGAAGGCTGAGAATGGGTCTTCAAAGAGTTTAATTAGCagcagcactttgaagagtcaaGTTATAACTCATAAAAAGAAGCCCGCGTCTTCTGTGGAAAAGTCTAAAACTACCCCAAAGACATTACCACAGTCAGTTGAAGTTCATACAATAGAAAGTTTAAAGGAACTTGATGCTTTTCATGTTGATAGAATAGAGTTGGGCACAGAAGAAAAAAGTAGCCTATATGTTGGCTCTGGGACTCCAGAAAATGCCAACACTATGAAGCATCTTATTGCAGTTGCCCAGGCAAAAAGGAGACTAGTAGCTCAATTTCAGTGTCATCCTTTTGACCTTCATAATGCTCAAGTGGGAACACCTAGCCCCTCTATAGTGCAGCCATTTCTGTCTGTGTCTAGCAATAATGGCCAGGCAGATATGCAGGGAGTTAATGAGCAGCCATCATTAGTGTCTCCGTCAACCAACGGGTATCACTCCATTTCTCAAAATCAGCTTGATGCTGAAGAAAATGAGGAGAGAAAACTTGGTTTGGGGCAAAGGGCTGTTGTGGGATCTCTGAGTGGCGGTACTGAGGCTGCTATTGCGCGTGATGCCTTTGAAGGAATGATCGAGACTTTGTCAAGGACCAAGGAAAGTATTGGGCGCGCAACACGTCTTGCCATTGATTGTGCTAAGTATGGTTTTGCCAATGAGGTTGTTGAACTTCTTATCCGAAAGCTAGAAAGTGAAACTAGTTTTCATCGTAAAGTGGATTTGTTCTTTCTTGTTGATTCTATAACCCAGTGCTCAAATAATCAAAAAGGCATTGCAGGTGCTTCCTACATTCCTGCAGTTCAAGGAGGATTGGCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGGACCAGTGCCCGTGAAAATCGTCGCCAATGTCTCAAGGTTTTAAGGTTGTGGCTTGAGAGGAAAATTTTTCCTGAATCAGTTCTTCGCCGTTATATGAATGATATTGGGGGTTCAGGTGATGATATGACAGTTAAGCATTCTTTCCGGCGTCCTTCTCGAGCAGAACGATCTGTGGATGACCCAATTAGAGAAATGGAGGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTGGCTGGCATTTTATCTGCGCGCGTGTTTGAAGATGACGACGATGATTTTCTTAATGTGTCTCCAGAGGATCCTACTCACACTGTTGTGGATTCAGAAACTTCTACTGTTACCCCAAGTGACAAACGCCACTGTATTTTGGAAGATGTTGATGGTGAGTTAGAAATGGAGGATGTTTCAGGTCATCCAAAGGATGAAAGGCCTGTATTGTTGAACAGTACCTCAGAAATGGATTTTCAACTTCAGGGCTCAGATAGGATCTTGGATCCAGCATCAAACGTTTGTGAAGAGGTACATGTAAATCTTGAGGCTTCTCCTCCATTACCACTTGATTCACCTCCTACTCCCCCACCTTTGCCTTCTTCACCACCACCGCCACCACCACCTCCATCATCTCCATCTCCTCCCCCACCCATGCCACCCACATTGCAACAACCCCCACCTCCTCCTTTACCACCCACCGGTCCTACACCACCATTGATTTCTCAATCTTCTGGAACAGCTCAGCCTTCGACTTTTACCCAGGTGTTAGTGCCATCTCAATCATCACACCAGTCATCACCACTATCAGGGCATCAGCAGCTTCATAACTGCAACGGCACAACTAATTCCTCTATACAGGGAATCCAAATGACTGGAAATTCTTTTCCTGGAGGCCAAAATAGTTCAGTTCTGAAGAATGAAATATTGCCACAGCCATCTGCTTGCTTTCCTCCAATGGCAGGTTGCAGCTCTCAGGAACCTTCTGCGTTAAACCCTACAAGGCAGTTGGAATATGGACAGAGCGATATGTATCTAAATTCTCAAATTCCTCAACCAAATCAGCAATTTCAGCTGGGTAATCCTCGCTTTGCTCCAAGACACATGCATCCTACCCCACCCCAAAATCCATCTTCTAATCAGTATTCATATCCGAAGCCTTCAGTTCAGCAGCATCTTCCACATTCTTTCTGTCCTCCATATGCATTGACATCCGTTCCAGATGGCCAGAGGCAATTTGTTTCTAATGAGCAATGGAGGATGCCAACAAGtgaatttaaattaaacaaTCAACATGGTTTGTGGAGAGGGATAAATCCTTCATGTCCGGGTCCATCCTTTGGGCAGGAAGATAATTTCCGGCCGCCACTTGAAAGACCACCAATGAGCAGCGTAGGTTTTCAGCATGGGAACCCCAACAATATACCTGTTCCTCCTCCGAAGTCAGGATACGGTGTTCCTCAGATGTTCCCCTGTAGACCAGATATTCCTACTCTTAATTGTTGGAGGCCTACCTGA 4221 0.4198 MPPSRRRGANKAKANAHLKLGDLVLAKVKGFPAWPAKISRPEDWEKTPDPKKFFVQFFGTQEIAFVVPADIQAFTSEVKTKLTARCHGKTKCFTQAVREICAAYDELEKQKVGGLTDDTGDARAPSFDGAVGDIKDATDDVVLNVEKSKTIMEDVSTNLEHYKQRCGERDDQDDKPSASGRPTDSSSPVLSPVLERKSSVGTELNKHTIRSDLEDKSCLKKEVSDCKDVCDVEDFKQANNVQSVSIDGNKARKLVTGSRRRSEAAADKEISGFNIALSKGENSGETVKRGKKVKNAFFVDSADSSKSGPDINSGNKDKNLLKAKTRLKVKSELQEKFVDSKEADRNNSFKKNKTQVQGKRKLGMNETLHATKKFKRMDAKDKEPLQSLPEDMKSASPGFPVVDDKALKKSELKRSLSCLKTEKGLSSRAQTAIADSDNSVCEVLSGTKHHSQVRRRRRPVFLIDDDDDDEESKTPIHGGDSKNIKSPSLVSEPVKSNDPSLENGDVSQLTKGKPSALEDSHLNAHLTKLCDDSLPTEHPQKENADEVVAVNSTHIPEQLDPKLFPSNVEKLCSISPVNSPQSLPTTKSNAKRHKSSKALPEVLSNATQKKAENGSSKSLISSSTLKSQVITHKKKPASSVEKSKTTPKTLPQSVEVHTIESLKELDAFHVDRIELGTEEKSSLYVGSGTPENANTMKHLIAVAQAKRRLVAQFQCHPFDLHNAQVGTPSPSIVQPFLSVSSNNGQADMQGVNEQPSLVSPSTNGYHSISQNQLDAEENEERKLGLGQRAVVGSLSGGTEAAIARDAFEGMIETLSRTKESIGRATRLAIDCAKYGFANEVVELLIRKLESETSFHRKVDLFFLVDSITQCSNNQKGIAGASYIPAVQGGLARLLGAAAPPGTSARENRRQCLKVLRLWLERKIFPESVLRRYMNDIGGSGDDMTVKHSFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLAGILSARVFEDDDDDFLNVSPEDPTHTVVDSETSTVTPSDKRHCILEDVDGELEMEDVSGHPKDERPVLLNSTSEMDFQLQGSDRILDPASNVCEEVHVNLEASPPLPLDSPPTPPPLPSSPPPPPPPPSSPSPPPPMPPTLQQPPPPPLPPTGPTPPLISQSSGTAQPSTFTQVLVPSQSSHQSSPLSGHQQLHNCNGTTNSSIQGIQMTGNSFPGGQNSSVLKNEILPQPSACFPPMAGCSSQEPSALNPTRQLEYGQSDMYLNSQIPQPNQQFQLGNPRFAPRHMHPTPPQNPSSNQYSYPKPSVQQHLPHSFCPPYALTSVPDGQRQFVSNEQWRMPTSEFKLNNQHGLWRGINPSCPGPSFGQEDNFRPPLERPPMSSVGFQHGNPNNIPVPPPKSGYGVPQMFPCRPDIPTLNCWRPT 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01317 1406 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 453 - -
Tsu01g01317 1406 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 451 1406 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1275 1290 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1141 1206 - -
Tsu01g01317 1406 PANTHER PROTEIN HUA2-LIKE 1 1 453 - -
Tsu01g01317 1406 PANTHER PROTEIN HUA2-LIKE 1 451 1406 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 479 514 - -
Tsu01g01317 1406 Gene3D - 800 939 IPR008942 -
Tsu01g01317 1406 Pfam PWWP domain 21 104 IPR000313 -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 575 651 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 445 519 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1006 1021 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1253 1290 - -
Tsu01g01317 1406 Gene3D - 10 113 - -
Tsu01g01317 1406 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1088 1140 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 378 399 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 600 634 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1002 1021 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 1085 1206 - -
Tsu01g01317 1406 CDD HDGF_related 18 103 IPR035496 -
Tsu01g01317 1406 SUPERFAMILY Tudor/PWWP/MBT 13 108 - -
Tsu01g01317 1406 ProSiteProfiles CID domain profile. 799 940 IPR006569 -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 179 193 - -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 163 202 - -
Tsu01g01317 1406 SMART PWWP_4 18 75 IPR000313 -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 338 360 - -
Tsu01g01317 1406 SMART 558neu5 806 937 IPR006569 -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 575 589 - -
Tsu01g01317 1406 Pfam CID domain 806 930 IPR006569 -
Tsu01g01317 1406 MobiDBLite consensus disorder prediction 163 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01317 Tsu-Chr1 12472306 12485089 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01317 01 12472306 12485089 Tsu01g01317 01 12472306 12485089 ECH