Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01077 ATGGAGGATCTTCCACAAGGTTACCGTCCTAACGTTGGTGTCTGTCTCATCAACTCTGATGATCAGatatTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGGGGGTATTGAAGACGGTGAAGAGCCGAAATCTGCTGCTATTAGAGAACTTCGAGAAGAAACTGGAATTGTATCAGCCGAGATAATCGCTGAGGTTGATAAATGGTTGACATATGACTTCCCTCCTGCTGTGAAGGCTAAAGTCAATCGTCTGTGGGGAGGCGAATGGCATGGACAGGCGCAGAAATGGTTTCTCATGAGATTAACAAAAGATGAGGGTGAAATCAACTTAGCTACTGGTGAAGCGGACCCAGAATTTGCAGAGTGGAAATGGGCAAACCCTGAAGAAGTTATTGAGCAGGCGGTGGACTATAAGAGACCAACCTATGCAGAAGTTGTAACAACCTTCATGCCTTACTTTCAAGGAAATGCAATATCTGCAAAATGTAAATCGACAAAGTGGTGA 522 0.4464 MEDLPQGYRPNVGVCLINSDDQIFVASRLNVPGAWQMPQGGIEDGEEPKSAAIRELREETGIVSAEIIAEVDKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRLTKDEGEINLATGEADPEFAEWKWANPEEVIEQAVDYKRPTYAEVVTTFMPYFQGNAISAKCKSTKW 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01077 173 ProSiteProfiles Nudix hydrolase domain profile. 7 153 IPR000086 -
Tsu01g01077 173 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
Tsu01g01077 173 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 1 173 - -
Tsu01g01077 173 SUPERFAMILY Nudix 7 156 IPR015797 -
Tsu01g01077 173 CDD Ap4A_hydrolase_plant_like 7 155 IPR022927 -
Tsu01g01077 173 Pfam NUDIX domain 8 149 IPR000086 -
Tsu01g01077 173 Hamap RNA pyrophosphohydrolase [rppH]. 1 160 IPR022927 -
Tsu01g01077 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 159 - -
Tsu01g01077 173 PANTHER BNACNNG74470D PROTEIN 1 173 - -
Tsu01g01077 173 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Tsu01g01077 173 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01077 Tsu-Chr1 9961124 9963886 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01077 01 9961124 9963886 Tsu01g01077 01 9961124 9963886 ECH