Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g01055 ATGGGTGTTCTTGATAAACTATCAGATTATTTCTCTGTTTCTCATACAACTGGAAAGAGACGTAAACCAATGCAGACAGTTGAAATCAAGGTGAAAATGGATTGTGATGGTTGTGAAAGAAGAGTTAGGAATTCTGTTGCTCACATGAAAGGTGTGAAGCAAGTGGAGATAAATAGAAAGCAAAGTAAGGTAACAGTTAGTGGTAATGTTGACAGAAACAGAGTATTAAAGAAAATACAGAGCACTGGAAAAAGAGCAGAATTTTGGCCTTATATTCCTTACAATTTGGTGGCTTATCCTTACATATCACAAGCATATGATAAAAAGGCACCTGCTGGTTATGTGAAAAACTCAATCCAAGCACTGTCTAGTCCAAATGCAATGGATGAGAAACTCACTAACATGTTTAGTGATGAAAACCCTAATGCATGTTCCATCATGTAA 444 0.3626 MGVLDKLSDYFSVSHTTGKRRKPMQTVEIKVKMDCDGCERRVRNSVAHMKGVKQVEINRKQSKVTVSGNVDRNRVLKKIQSTGKRAEFWPYIPYNLVAYPYISQAYDKKAPAGYVKNSIQALSSPNAMDEKLTNMFSDENPNACSIM 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g01055 147 SUPERFAMILY HMA, heavy metal-associated domain 23 90 IPR036163 GO:0046872
Tsu01g01055 147 Pfam Heavy-metal-associated domain 30 84 IPR006121 GO:0046872
Tsu01g01055 147 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 147 - -
Tsu01g01055 147 ProSiteProfiles Heavy-metal-associated domain profile. 33 88 IPR006121 GO:0046872
Tsu01g01055 147 CDD HMA 28 87 IPR006121 GO:0046872
Tsu01g01055 147 Gene3D - 12 89 - -
Tsu01g01055 147 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 147 IPR045181 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g01055 Tsu-Chr1 9727498 9729875 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g01055 01 9727498 9729875 Tsu01g01055 01 9727498 9729875 ECH