Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00453 ATGGAGAATCTAACAGTAGACGCAACACTTAAACGACACCAGAGAGAAACCACCGCATCAGAATCAGAGTCACCACTCtcttccaccaccaccaccaccatgtCCTCCATTGACCAACCTATGAAAAAGCGAAAGCTCCACGACTCTCCATTGCCTGAAACTACCGCCCCCTTTCTGCAAACCCTACCTACTCCTCCGCCGTTATCTCAAGATCAAATTCTCGCTAAACGCAGAAACAAAGACGCAATTCGAAACGTTCACGAAGTTTACAAGCGAATTAAACGTTGCCTCAATCAGAAACAAACTCCTTCCACACCTGACCTTGACCAGAGCTTTCTTGCTCTCATCGCTTCTTCCAGAGGTTGTATGAGTGTACAGAAAATTGTGGCCGATTTAATTCCTCGATATGCTTGTCACTGTCCAAAAGCTTTGGAAGCTGCAACTAAAGTGGTTATCAATATGCATAACTGGAGTTTGGCTTTGATCAGGAAGGAAGAGGATTCCAGTGGTATTGCATTTGAAATTGCTAAAGCTTGTATTTTTGGATTGGCTGATATTTGCTGCATTGCTTCTTCCGTAGCACTAACATCAGCTGTAATTAGAGGAATTCGCTCAGCAGTTTTTCAAAATGTGCTCACCTTTTTTGTTGCCTTATTTGAGGGAAAGGATGTATCAAAGATCATTGACAAGAATTTCCTGAATATGCAAGATAACCCCGAGGTCTTTTCTGAATTGAAACAAAAGGTTTTAGATGAAGATGATTCTTCATTGACTAAATTGTCTAAGTTTCATATATTATGTATACTTTGGGTATTCTTCTCTTGTCCAAAAGAATTGCTTGCAGCTTGTTTGGAACTCTTACGCTCCGCCACAAATAAGGGAACTTCTAATGAAGGACTACGTTTTATGAGCATGGTGACTAGCTTGCGTAATGATGATGAATCAGTTCACCCTTTGGGTAGAGAAAACGATGGACCTAAATCATGTACCGATTCTATTGGGCAAGGCACCAAAGCGATTGAGGTTGGCGAGAAAGTTATCACCGATGACAACCATATATCCGATGCTATTCGAAAGAGCTGCTTGCTTATGCTGGTTCTTAACAAGGACCCCTCACTGCGGAAATGGACTCTGCGTCGATGTAAGAAGTTACTTGACTCGCTCACTGATGCTTCACTGGAAACTACATCGATATTGCAAGGAATTCTTGGAATGTTTGCACAACAGACAGAGTTAGAAGACTGTGAAGTAGATAGTGATGAAGACAAGTCTGATTCTTCAATTTTCATGAATAGAAACTATTCGTTTCCTAGGATCTCTGAGGAACATGAAAGTATTGGTGAAACATCACAAAAAGCAGGTTCGCATTTTGATAATGGAGGGGTATCAAGGTCTATGGGCATTGAGAAAGGTGATATGCCTAATATTAGATGTTCCACACCTAGGGACTCTGTAAGCCATCAGATATTCTCACCTACAGTTAGAACAACGGTAGACTATAGGAGTAATTCATTTGAAGGTAGAAATGATTTCCCAATTGTCGAGAAAAATCAAGTTTTGAATATGAATTTCAATTCACCTCTGTCGAGGTCCTCTAGTGGAGCTGTCAGCAATGTTTTGGCTTCTCCTAATCACCATTTTATGTCACCGACTTCTTTAACTAAAAGTCAAATTGTTTGGTGCGGTGATGGGGATCCTGCTGCTGTTGATATTGTTGCTGCTTCTAAGCAGCTATGGGTAGGTTGTGTAGCACCTGACATGCCCGAAAGCCATATTAGGTTTGAAATAGAGAGGTTTGGTCCTATTGAAAAGTTTATATTCTTCCCATTGAAAGGATTTGCTTTAGTTGAGTACAGAAGGATAATTGATGCGATAAAAGCTCGACACTATGCACCTGGAAATTTTCCTTGCCGTGTAAAATTCATGGACATAGGACTTGGTACTAGGGGTGCAATGAATGGTGTTGCAATTGGCTCTAGTTTTCATATTTATGTTGGAAATATTTCCAGTCAATGGGCCAAGGATGAGATTCTTCACGAATCAAGGAAAGTAGTTTATAAGGGTCCTCTCACAGTGATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAGTTTGAAACCCCTGAAGAAGCTGCCTCCGTCATGTTGCATCTGAGACAGTTCCGAAGAGAAAGAAGTAATTATATCCCGCATTTTGGTCCAGGAACAGTTAATGTTGTATCACCTCATTCTCGAACTTTACCTGGGAGCCCTGCTGACAGCAGTCGAACAAGAATGTCTCACTTGTGTAACATACTATCTTCATTGCGTGCAAAGTATAATATTAATCAAAACATAGGCCTCCATGATAATTATATTACTGGAAATAGTTGTTCTTCTTCCATGCGTGAGGAAGATACAGTGCCATCCAGCACTCTTTGGATAACTATTCCTCATAGTAGTTCCCAGTTTCTCACAGATGATGAGCTAATGAGTATTTGCAACCTTGCTATTGGAAACTCTGGTTCCATTGCACGGTTGACACAAGCAAAAATGCACATGGGAGGTGGTTGGTTTGTTGAATGTAGTAATGTTGATGGTGCAGTTTCCGTCTTAAAGAATCTGCGTGCTTGTCCAGGATTGTTCTTCCAAATAGAATTCAGCAAACCGGGAAATCAGAATGCTGTACCGTTTTCAATTAAACCTGAAAACCATGATATGGAGCTTGTTTCCCCCAGACTAAATGCTGAGAATCATGGCAGTGGAGTACATGGTGCACCTCTGTCTCAGTCAAATCGGCACTTCCCTGATTCAAGGGAGATATCAGAAGTTGGAGGAAGGAAAGATGGTTATAATCATTTATCACTGGATCCTCATCAAGGAGGAAATGTTCCACATGTATACTCTGGAGCACATGGACCTTCCATTCCACCACCACAACAACTTCAGTCATCTCCTTTCACCCGCCCTGTTTATGTTCCTCCAAATGGGCCATGGGATCCCCATGGCATAAATAACCAGGTACCTGTCAACCAATTCCAGACAGGAgtaatgccacataattttaATGGCAGTCCTTTTATACCTGCTTCAGTAACTCCAGTTGGTCAGATACAAGGAACTCCAATGCAACCCTATAACCAACAGGTTCCTCCGTCAATTGTACCACCACCTTTGTCATCTTTGCCACCTCCTCAGCCTGAAATGCCATCTCTTCATCCGCATCCTTCTTCTCTCCCACCTCTACCCCAGACACAACCACCCTTGGTTCCTCCACCACCTGGTTCTCCTCCTCCACCACTGCCTGTCCAAGAACCAGTCAATATGGAATGTTCAGGGCAGACACTGCAGTATCAATGGCAGGGCAATCTCTGTAAAAGTGGAGTTAGCTACTGTACAATTTATGCATGCAGAGCAGATTCAAATATTTGCAGATATTCGAATGCCATACCCGAGCCTTCCGAATGGCCCACCAGATTAGACATGACTAAACGAACAGATTTTCGACATGTGCAAACAACATTTGCTGCAACTCCATCTCATAGAAGGGAAGTGTGCCGTTTAATCCCATCTTCCACAAGTGACGACAGAAGGTTTCAGGATTTCGTATCATATTTAAAACAGAGGGATTGTGCTGGAGTTATTAAAATTCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTCATACTTCCTCATTCACTTGAAATGTGCTCGTTGCTTTCTATTGCACCCGATCCATCTGATTGCCTAATTGCTTTAGTTTTACCCAAAGAAACAAACTTTGAGTGGATGTGA 3777 0.4149 MENLTVDATLKRHQRETTASESESPLSSTTTTTMSSIDQPMKKRKLHDSPLPETTAPFLQTLPTPPPLSQDQILAKRRNKDAIRNVHEVYKRIKRCLNQKQTPSTPDLDQSFLALIASSRGCMSVQKIVADLIPRYACHCPKALEAATKVVINMHNWSLALIRKEEDSSGIAFEIAKACIFGLADICCIASSVALTSAVIRGIRSAVFQNVLTFFVALFEGKDVSKIIDKNFLNMQDNPEVFSELKQKVLDEDDSSLTKLSKFHILCILWVFFSCPKELLAACLELLRSATNKGTSNEGLRFMSMVTSLRNDDESVHPLGRENDGPKSCTDSIGQGTKAIEVGEKVITDDNHISDAIRKSCLLMLVLNKDPSLRKWTLRRCKKLLDSLTDASLETTSILQGILGMFAQQTELEDCEVDSDEDKSDSSIFMNRNYSFPRISEEHESIGETSQKAGSHFDNGGVSRSMGIEKGDMPNIRCSTPRDSVSHQIFSPTVRTTVDYRSNSFEGRNDFPIVEKNQVLNMNFNSPLSRSSSGAVSNVLASPNHHFMSPTSLTKSQIVWCGDGDPAAVDIVAASKQLWVGCVAPDMPESHIRFEIERFGPIEKFIFFPLKGFALVEYRRIIDAIKARHYAPGNFPCRVKFMDIGLGTRGAMNGVAIGSSFHIYVGNISSQWAKDEILHESRKVVYKGPLTVIDLSCEFALLMEFETPEEAASVMLHLRQFRRERSNYIPHFGPGTVNVVSPHSRTLPGSPADSSRTRMSHLCNILSSLRAKYNINQNIGLHDNYITGNSCSSSMREEDTVPSSTLWITIPHSSSQFLTDDELMSICNLAIGNSGSIARLTQAKMHMGGGWFVECSNVDGAVSVLKNLRACPGLFFQIEFSKPGNQNAVPFSIKPENHDMELVSPRLNAENHGSGVHGAPLSQSNRHFPDSREISEVGGRKDGYNHLSLDPHQGGNVPHVYSGAHGPSIPPPQQLQSSPFTRPVYVPPNGPWDPHGINNQVPVNQFQTGVMPHNFNGSPFIPASVTPVGQIQGTPMQPYNQQVPPSIVPPPLSSLPPPQPEMPSLHPHPSSLPPLPQTQPPLVPPPPGSPPPPLPVQEPVNMECSGQTLQYQWQGNLCKSGVSYCTIYACRADSNICRYSNAIPEPSEWPTRLDMTKRTDFRHVQTTFAATPSHRREVCRLIPSSTSDDRRFQDFVSYLKQRDCAGVIKIPASKSIWARLLFILPHSLEMCSLLSIAPDPSDCLIALVLPKETNFEWM 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 1028 1095 - -
Tsu01g00453 1258 PANTHER NUCLEIC ACID BINDING PROTEIN 34 1258 - -
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 911 956 - -
Tsu01g00453 1258 SMART rrm1_1 577 640 IPR000504 GO:0003723
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 929 947 - -
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 1 70 - -
Tsu01g00453 1258 Pfam SPOC domain 1107 1249 IPR012921 -
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 20 39 - -
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 1042 1095 - -
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 1 19 - -
Tsu01g00453 1258 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 34 1258 - -
Tsu01g00453 1258 Gene3D - 567 649 IPR012677 -
Tsu01g00453 1258 MobiDBLite consensus disorder prediction 442 462 - -
Tsu01g00453 1258 SUPERFAMILY RNA-binding domain, RBD 563 635 IPR035979 GO:0003676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00453 01 3860748 3869732 Tsu01g00453 01 3860748 3869732 ECH