Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00446 ATGGAGCTTGTAACCGCAAGTGATCTTCTCGTAACTGCATCTGTAGCACTTCTTATTTCATTCCTCGTTGCAAAACTTGTTTCCTTAGCCACCACCGACACTCCTCATCTTCACGATCAACCGGTTCATCGAGTTGAACAGCGATTTACGGTTCAGTCACCTCAAACAAAGACCCGAACCGGTTTTATTAGTCCGGTTCATGTTACATCAATAGCGAATTtagaaactcaacataatactAGAGACGCTGCTACGGTTGTGTCCGATTCCAACGTTGCCGCCGAGTTACCACCGACAAACTCAGACGTAACTAGTTACGCTGCGGTTGATTCCGATTCCAACGTTGCCGCCGAGTTTCCGCCGACAAACTCATACGTAACAGACGCTGAGGTTGATTCTAGTTCTAACGTTTCTGTCAAGTTACCGCCGACAAACTCAAACGTAATAGATGCTAAGGTTGATTCCGATTCCAACGTTGCCGGTGAGTTACCGCCGACAAACTCAGACGAAACAGAGGCTAAGGTTGATTCCGGTTCCGACGTTGGTGTTGAGTTGTTGCCGAGCTTAGACGAAGTAGATACTAAGGTTGAATCTGATTCcaatgttgttgatgatttttcgAAAGAAGAAACGGTCGTGAAAAGTGATGATTCTATAAAACGGAGGAACGATGAAGTTGTGGAAGAAATCATTGAAGAAAAATCAACTGAGAaggttgttgatgatgatgatgatgatgaagatgattggGAATGGGAAGGGATTGAGAGGAGTGAGGTGGAGAAGATGTTTATGGAGGCTACAGAATTTGTTGGTGAGAAAGGGTATATTGGTAAttgtgatgatgatttggaGATGGAGTTGTATGGACTTCATAAGGTTGCTATGGAAGGACCTTGCCGTGAATCTCAACCAATGCCGCTTAAACTCTCCGCACGTGCTAAATGGAATGCTTGGCAAAAGCTGGGGAACATGAGTCCAGAGGTCGCAATGGAGCGATATATCAGCCTTCTTTCAGATAAATTTCCCGAATGGTTGAAGAATACTTCTGCTgGAATAACTGAAGATAAACCCACAGGATCAGAAGTTTCGGAGTCTGCTGCTACTGATTCGAGCTTAGCTTTGTCTCATCAACAAATAATCTTAACCGAAAGGGAACTTGTTCAAGAGTCTGGTGCCCCGGAGCTTATCCCAGATACAAAGTCAGATTCGGAGAACAATGTTAAGAAATGA 1233 0.412 MELVTASDLLVTASVALLISFLVAKLVSLATTDTPHLHDQPVHRVEQRFTVQSPQTKTRTGFISPVHVTSIANLETQHNTRDAATVVSDSNVAAELPPTNSDVTSYAAVDSDSNVAAEFPPTNSYVTDAEVDSSSNVSVKLPPTNSNVIDAKVDSDSNVAGELPPTNSDETEAKVDSGSDVGVELLPSLDEVDTKVESDSNVVDDFSKEETVVKSDDSIKRRNDEVVEEIIEEKSTEKVVDDDDDDEDDWEWEGIERSEVEKMFMEATEFVGEKGYIGNCDDDLEMELYGLHKVAMEGPCRESQPMPLKLSARAKWNAWQKLGNMSPEVAMERYISLLSDKFPEWLKNTSAGITEDKPTGSEVSESAATDSSLALSHQQIILTERELVQESGAPELIPDTKSDSENNVKK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00446 410 MobiDBLite consensus disorder prediction 387 410 - -
Tsu01g00446 410 MobiDBLite consensus disorder prediction 352 371 - -
Tsu01g00446 410 Pfam Acyl CoA binding protein 262 338 IPR000582 GO:0000062
Tsu01g00446 410 Gene3D - 255 361 IPR014352 -
Tsu01g00446 410 PANTHER ACYL-COA-BINDING PROTEIN, ACBP 140 381 - -
Tsu01g00446 410 MobiDBLite consensus disorder prediction 155 177 - -
Tsu01g00446 410 SUPERFAMILY Acyl-CoA binding protein 260 345 IPR035984 GO:0000062
Tsu01g00446 410 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 260 347 IPR000582 GO:0000062
Tsu01g00446 410 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 3 140 381 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00446 8 364 Acyl Lipid Metabolism Gene Families AT4G24230 34.545 1.08e-40 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00446 01 3791158 3795548 Tsu01g00446 01 3791158 3795548 ECH