Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00445 ATGAAGATTTTCAATTCTTTTCCAATTGTTCTACTGCTAATATTCTGCAGTAGACACATAACAGTAGCACAAACCAAAACACCACAAACTAAAAACACATACATAATTCACATGGACAAATCAACCATGCCAGAAACATTCACTGATAATGATCACTTTAACTGGTTCGACACATCGCTAAAATCAGTATCCGAAACAGCAGAGATTCTCTACACTTACAAACACATAGCTCATGGATTCTCAACAAGACTAACAAGCCAAGAAGCTGAAACACTTCTAAAACAACCAGGAATTCTCTCTGTTATACCTGAACTCAGATACCAACTTCACACAACAAGAACACCAGAGTTTCTCGGATTGCCGAAAACAAACACTCTTTTACCTAATTCAAAACAATTGAGTGAGGTTATTATTGGTGTTCTTGACACTGGTATATGGCCAGAGCTAAAAAGCTTAGATGACACAGGACTTGGTCCAATACCAAGAAGTTGGAAAGGCGAATGCGAAACCGGTAACAATCTTAATTCATCAAACTGCAATAGAAAACTGATTGGTGCAAGGTTTTTCTCAAAAGGGTATGAAGCAACACTTGGTCCTATTGATGAAACAACAGAATCAAGATCAGCTAGAGATGATGATGGACATGGAAGTCATACCTTAACAACAGCAGGTGGTTCTGAAGTAACAGGAGCTAGCTTCTTCGGTTTAGCTTCCGGTACTGCAAGAGGCATGGCTACACAAGCGCGTGTCGCGGCATATAAAGTATGTTGGCTTAGTGGCTGTTTCACTTCAGATATAGCTGCAGGAATCGATAAAGCTATTGAAGACGGTGTTAACATCTTATCGATGTCAATTGGTGGTGGCCAAACAGAATACTACAGAGACATCATTGCAATTGGTTCTTTCACAGCAATGTCTCATGGAATTCTAGTTTCGGCTTCAGCAGGAAACGGTGGACCAAGTGCCGAAAGCTTGTCCAACGTAGCACCGTGGATAACAACAGTCGGAGCAGGAACAATTGATCGTGATTTTCCATCTTATATATCACTTGGAAATGGAAAAAATTACACTGGTGCGTCACTTTACAATGGAAAACCTTTACCTGATTCATTGCTACCACTTGTTTATGCAGGTAATGTTACAAATTCCTCAGTTGGGTATCTttgtatacctgattcattaaTAAGTTCAAAAGTTTCCGGCAAAATTGTGATATGTGAAAGAGGTGGAAACTCAAGAGTTGAAAAGGGTCTAGTTGTAAAAACTGCTGGTGGACTTGGAATGATTTTGGTTAACAGTGAAGAGTATGGTGAAGAGTTAATTGCTGATCCTCATCTTCTTCCAGCAGCAGCATTAGGTCAAAAATCAGGCACAATTCTAAAAGACTATGTTTTTGCTACGAAAAATCCAGCGGCTAAACTTGTTTTTGGTGGCACACACTTGCAAGTTCAACCTTCACCAGTGGTAGCAGCATTCAGTTCAAGAGGACCAAATGGTTTAACACCAAAGATTCTTAAACCGGATTTAATAGCTCCGGGTGTAAACATATTAGCCGGCTGGACCGGTTCAGTTGGACCAACCGGTTTAACGGTTGACAAAAGGTACGTGAATTTCAATATTATATCAGGAACTTCAATGTCATGTCCTCACGTGAGTGGTTTAGCTGCAATAGTTAAAGGAACTCACCCTGAATGGAGTCCTGCTTCTATACGGTCAGCACTAATGACCACCGCATACACCTCATATAAAACCGGACAAACAATCCAAGATGTTACAACCGGGAAACCGGCTACTCCCTTTGATTTTGGATCAGGACACGTGGATCCTGTATCCGCCCTTGATCCTGGTCTTGTTTATGATCTCAACGTCGATGATTATCTTGGGTTTTTTTGTGCTTTAAACTACACGTCgtttcaaatcaaaattgctGCGAGAAGAGATTACACGTGTACCAAGAAACATAGGCTTGAAGACTTTAACTATCCTTCTTTTGCTGTTGCATTGGAAACTGCTTCGGGAATTGGTGGTGGTTCGAAAAAACCGGTAACAGTTGAATATAATAGGATTCTTACGAATGTTGGAACTCCGGGAACGTATAAAGCTTCTGTGGTGGTGGAATCTTCGTCGGTGAAGGTTGTGGTTGAACCAGAGATTATTACTTTTAAGGAAGTGAATGAGAAGAAGGGTTATACGGTTCGGTTTATTTGTGATCCGATGCCTTCTGGAACGAAGGGGTTTGGTTATTTGGAATGGAATGATGGGAAGCATAGGGTTAAAAGTCCAATTGCTTTTAGTTGGACTTGA 2304 0.4015 MKIFNSFPIVLLLIFCSRHITVAQTKTPQTKNTYIIHMDKSTMPETFTDNDHFNWFDTSLKSVSETAEILYTYKHIAHGFSTRLTSQEAETLLKQPGILSVIPELRYQLHTTRTPEFLGLPKTNTLLPNSKQLSEVIIGVLDTGIWPELKSLDDTGLGPIPRSWKGECETGNNLNSSNCNRKLIGARFFSKGYEATLGPIDETTESRSARDDDGHGSHTLTTAGGSEVTGASFFGLASGTARGMATQARVAAYKVCWLSGCFTSDIAAGIDKAIEDGVNILSMSIGGGQTEYYRDIIAIGSFTAMSHGILVSASAGNGGPSAESLSNVAPWITTVGAGTIDRDFPSYISLGNGKNYTGASLYNGKPLPDSLLPLVYAGNVTNSSVGYLCIPDSLISSKVSGKIVICERGGNSRVEKGLVVKTAGGLGMILVNSEEYGEELIADPHLLPAAALGQKSGTILKDYVFATKNPAAKLVFGGTHLQVQPSPVVAAFSSRGPNGLTPKILKPDLIAPGVNILAGWTGSVGPTGLTVDKRYVNFNIISGTSMSCPHVSGLAAIVKGTHPEWSPASIRSALMTTAYTSYKTGQTIQDVTTGKPATPFDFGSGHVDPVSALDPGLVYDLNVDDYLGFFCALNYTSFQIKIAARRDYTCTKKHRLEDFNYPSFAVALETASGIGGGSKKPVTVEYNRILTNVGTPGTYKASVVVESSSVKVVVEPEIITFKEVNEKKGYTVRFICDPMPSGTKGFGYLEWNDGKHRVKSPIAFSWT 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00445 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Tsu01g00445 767 CDD PA_subtilisin_like 347 474 - -
Tsu01g00445 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Tsu01g00445 767 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 22 765 - -
Tsu01g00445 767 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Tsu01g00445 767 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Tsu01g00445 767 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tsu01g00445 767 Pfam Subtilase family 135 604 IPR000209 GO:0006508|GO:0008236
Tsu01g00445 767 SUPERFAMILY Subtilisin-like 109 617 IPR036852 GO:0004252|GO:0006508
Tsu01g00445 767 Pfam Fibronectin type-III domain 658 763 IPR041469 -
Tsu01g00445 767 SUPERFAMILY PA domain 373 435 IPR046450 -
Tsu01g00445 767 MobiDBLite consensus disorder prediction 200 224 - -
Tsu01g00445 767 Gene3D - 341 482 - -
Tsu01g00445 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 765 IPR045051 -
Tsu01g00445 767 CDD Peptidases_S8_3 107 579 IPR034197 -
Tsu01g00445 767 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Tsu01g00445 767 Gene3D - 630 766 - -
Tsu01g00445 767 Gene3D Peptidase S8/S53 domain 136 626 IPR036852 GO:0004252|GO:0006508
Tsu01g00445 767 Pfam PA domain 373 458 IPR003137 -
Tsu01g00445 767 ProSiteProfiles Serine proteases, subtilase domain profile. 106 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00445 Tsu-Chr1 3779902 3782716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00445 6 767 Subtilisin-like Serine Gene Family AT5G67360 61.488 0.0 976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00445 01 3779902 3782716 Tsu01g00445 01 3779902 3782716 ECH
Tsu01g00445 01 3779902 3782716 Tsu07g00899 07 7344221 7349201 PCT