Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00444 ATGGAATCTACATATAGGACATGGATACATGCCACCAAAGATAGTTCTAGCATGTGGAACCCTAATGAACTCCGAAGAGATTTACTTACTACCCTTGGTACTGCTAAATGGCAGTTAGAGGAATTTGAACGCGAAGTTAAGTCAAGTCATAGCAGAAATCCGGGTGGTGATGCAAGAACTAGGCACCGGGATTTTATCACTGCTATTgatgaaaagataaaaaaagttGAGCATTCGTTAAATGAATCGAGCCCTTCAGGTGGTAAGGAATCTAAGCCATGGGTGTGTTTGGACGAAGGAGAAAAAGATGAGCTCGCTTTCTTTCTTTCAGGAATGCCACTAGCAGCTGAAAGCAACAATCCACAATTATCTGATAAGAATTCAGTTTCACCGCCTGGTGTTGGCGAAGAAATGGAGGAGTTATCACTTGGGCATCGTAGGGCAGCTAGCGCTAGTGCTGATATTAGTTGTTGGAAAATTTCAGTTTCCGATGATCCGCAGCAGTTGAGTTCCTCCAGTGGTTCGTCTGGTGCAATGCATAAGGTGCCTAGTTTATCGGGATTTTTTAGTTCCGTGGAATCTATCTCCAAATTGAAGTGGCCTAAGAATGGTTATGGTTATAGAAAACTGAAAACAGTGGAGCATCATAAAGAAACAGATAGTGAACTAATTCCAATGGCTGAATTGAATAGAGGCAACAATACATTCTATGAAAGAAATAAAAGTAGCCTCGATAGTTCCGACGAATGGTATAACAAGCAACTCTATGGATGGTGTGGTGCTATTCAGAGACAGCTTCAAAGATCTCAATACCAAATACAATACAGTCGGCTTGCTCGAATAACAGTTTCAATGGTTTTTCTCCTTTGCTTGATTGTTTTAATTACATTTCACACAATGTAG 903 0.4009 MESTYRTWIHATKDSSSMWNPNELRRDLLTTLGTAKWQLEEFEREVKSSHSRNPGGDARTRHRDFITAIDEKIKKVEHSLNESSPSGGKESKPWVCLDEGEKDELAFFLSGMPLAAESNNPQLSDKNSVSPPGVGEEMEELSLGHRRAASASADISCWKISVSDDPQQLSSSSGSSGAMHKVPSLSGFFSSVESISKLKWPKNGYGYRKLKTVEHHKETDSELIPMAELNRGNNTFYERNKSSLDSSDEWYNKQLYGWCGAIQRQLQRSQYQIQYSRLARITVSMVFLLCLIVLITFHTM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00444 300 MobiDBLite consensus disorder prediction 117 136 - -
Tsu01g00444 300 Gene3D - 1 84 - -
Tsu01g00444 300 MobiDBLite consensus disorder prediction 43 62 - -
Tsu01g00444 300 PANTHER EXPRESSED PROTEIN 1 299 - -
Tsu01g00444 300 SUPERFAMILY t-snare proteins 1 82 IPR010989 GO:0016020|GO:0016192
Tsu01g00444 300 Pfam Syntaxin 6, N-terminal 1 77 IPR015260 GO:0016020|GO:0048193
Tsu01g00444 300 PANTHER OS05G0443700 PROTEIN 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00444 Tsu-Chr1 3763864 3766257 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00444 01 3763864 3766257 Tsu01g00444 01 3763864 3766257 ECH
Tsu01g00444 01 3763864 3766257 Tsu07g00901 07 7353514 7356108 PCT