Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00431 ATGGCTTCTTCAACTCTTCTCTCACCATCCATGAAACTCATGATCGCTTTAGTTCTACTAACCTTCACAGTTTCACTAGCCTTAGACATGTCGATCATCTCCTACGACAAAACTCACCCTGACAAATCAACACAAAGAACCGATAAAGAAATGATGAACATGTACGAAGAGTGGTTGGTCAAACACGGAAAATCATACAACGGTTTAGGTGAGAAAGATAAGAGATTTGAGATCTTCAAAGATAATCTGAAATTCATCGATGAACATAATAGTCAAAAGGATTTGAGTTATAAATTGGGGTTGAACCGTTTCGCGGATCTAACGAATGAAGAATATAGAGCCAAGTTTTTGGGTACTAAGATGGATCCGAACCGGAGGATGAAGAAGTTGGGTTCAAGAAGCAATAGATATGCGCCACGTGTCGGTGATAAATTGCCTGAATCTGTTGATTGGAGAAAAGAAGGTGCTGTTGTTGGAGTCAAAGATCAAGCAAGTTGTGGGAGTTGTTGGGCATTCTCAGCAATCGCTGCAGTTGAAGGAATAAATCAGATTGTGACAGGAGATCTAATTTCATTATCAGAACAAGAACTGGTGGACTGTGATACATCCTATAATGAAGGATGCAATGGTGGACTTATGGATTACGCCTTCGAGTTCATTATCAATAATGGTGGCATTGACACTGAAGAGGATTACCCCTACCGTGCTGTTGATGGTAGATGTGACCAGAACAGGAAAAATGCTAAAGTTGTTACAATTGATGACTATGAAGATGTTCCTGCCTATGATGAATTGGCCTTGCAAAAGGCTGTTGCAAATCAGCCTATTGCCGTTGCTATTGAAGGTGGTGGTAGGGAATTCCAGTTATATGAATCTGGTGTATTTACTGGTAGATGTGGAACAGCACTAGACCACGGTGTTGCAGCTGTTGGATACGGTACAGAGAATGGTAAAGACTATTGGATTGTTAGGAATTCATGGGGTAGTAGCTGGGGAGAAGCCGGATACATCAGACTCGAACGTAATCTAGCTTCAAGCAGATCAGGAAAGTGTGGAATTGCAATTGAGCCATCTTATCCAATTAAGAATGGAGACAATCCCCCTAACCCAGGACCATCACCACCTTCACCTGTGAAGCCACCATCTGTCTGTGACAGTTACTATAGCTGTGCTGAAGGATCCACTTGTTGCTGTATTTATGAGTATGGAAAATCTTGCTTTGAGTGGGGATGCTGTCCTCTTGAATCCGCTACTTGCTGCGATGATCACTACAGTTGCTGCCCTCATGAGTATCCTGTCTGTGACATTTATGCTGGACTTTGTCTTAAGAGCAAGAACAACCCATTAGGAGTGAAGTTATTCAAACGAACTCCTGCCAAGCCCAACTTGGCCGTTGGAGGTAAGAACAAGATTAGCAGTACTGCTTAA 1428 0.423 MASSTLLSPSMKLMIALVLLTFTVSLALDMSIISYDKTHPDKSTQRTDKEMMNMYEEWLVKHGKSYNGLGEKDKRFEIFKDNLKFIDEHNSQKDLSYKLGLNRFADLTNEEYRAKFLGTKMDPNRRMKKLGSRSNRYAPRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYRAVDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQPIAVAIEGGGREFQLYESGVFTGRCGTALDHGVAAVGYGTENGKDYWIVRNSWGSSWGEAGYIRLERNLASSRSGKCGIAIEPSYPIKNGDNPPNPGPSPPSPVKPPSVCDSYYSCAEGSTCCCIYEYGKSCFEWGCCPLESATCCDDHYSCCPHEYPVCDIYAGLCLKSKNNPLGVKLFKRTPAKPNLAVGGKNKISSTA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00431 475 Gene3D Cysteine proteinases 34 363 - -
Tsu01g00431 475 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 163 174 IPR000169 -
Tsu01g00431 475 SMART Inhibitor_I29_2 55 112 IPR013201 -
Tsu01g00431 475 PANTHER CYSTEINE PROTEASE 35 391 - -
Tsu01g00431 475 SMART pept_c1 145 361 IPR000668 GO:0006508|GO:0008234
Tsu01g00431 475 Gene3D Granulin 381 444 IPR037277 -
Tsu01g00431 475 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 303 313 IPR025660 -
Tsu01g00431 475 SUPERFAMILY Cysteine proteinases 47 361 IPR038765 -
Tsu01g00431 475 CDD Peptidase_C1A 146 360 IPR039417 -
Tsu01g00431 475 Pfam Papain family cysteine protease 145 361 IPR000668 GO:0006508|GO:0008234
Tsu01g00431 475 Pfam Cathepsin propeptide inhibitor domain (I29) 55 112 IPR013201 -
Tsu01g00431 475 SMART GRAN_2 384 441 IPR000118 -
Tsu01g00431 475 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 320 339 IPR025661 -
Tsu01g00431 475 Pfam Granulin 395 442 IPR000118 -
Tsu01g00431 475 SUPERFAMILY Granulin repeat 381 415 - -
Tsu01g00431 475 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 35 391 - -
Tsu01g00431 475 PRINTS Papain cysteine protease (C1) family signature 163 178 IPR000668 GO:0006508|GO:0008234
Tsu01g00431 475 PRINTS Papain cysteine protease (C1) family signature 305 315 IPR000668 GO:0006508|GO:0008234
Tsu01g00431 475 PRINTS Papain cysteine protease (C1) family signature 320 326 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00431 Tsu-Chr1 3637276 3641276 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00431 01 3637276 3641276 Tsu04g02119 04 23410362 23413266 ECH
Tsu01g00431 01 3637276 3641276 Tsu01g04766 01 54805721 54808401 ECH
Tsu01g00431 01 3637276 3641276 Tsu01g00431 01 3637276 3641276 ECH
Tsu01g00431 01 3637276 3641276 Tsu07g00928 07 7601360 7605082 PCT