Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00430 ATGATCTTTGTGCTCAAAGCAGAATCTTTAGTATTTGCAGACCAAAGACTAAGTATAGTGTATCCAGTGATTCAAAAATTCAAGTCTTTGATTACTTCAGATCCATTAGGTGTTACAAAAACATGGATAGGTTCTGATATATGCAACTATAAAGGCTTCTACTGTGATCATCCACCAGATAACAATTCTGCTATTGCTTTAGCCTCGATCGATTTCAATGGTGCTTTTCCAATTGCTGTTCTAGGCATGAAAAGCTTAACATTCTTGGATATAAGGTTCAACTTTTTCTCTGGTGGAGTTCCTCAACAAATATTCACACAAAACCTTGAAGTTCTTTTCATCAATAACAATCTTTTGACacaaaatttacctgaaaattTAGGCATAAGTTCAAGTACTCATATTTTCTTACTCACTTTAGCTAACAACAAATTTATGGGACCAATACCGAGAAATCTTCCGAAAGCTTTATCGAGTTTATCCGAGGTTGTTTTACTAAACAATGAGTTAACAGGTTGTTTACCTCATGAAATTGGTTATTTTCAAGAAGCTATAGTTTTTGATGTTGGAAATAATCAACTTACTGGTCCTTTACCATTTTCACTTAGTTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTAGTAACATGTTTTATGGAATGGTTCCTGAAGTTGTTTGTGCTGAGTTGGTGAATTTGGTGAATTTTTCTTTGTCAGATAACTATTTTACACATGTTGGACCATTTTGTAGGATGTTGATACAAAGAGGTGTTCTTGATGTTGGAAAAAATTGTATTCATGATCTTCCTTTTCAAAGATCAATGGAAGAGTGTGCTCAATTCTATGCACAACCTAGGATGTGTCCTTTTATGTGGTTTCATAGTTTTATTCTTCCTTGTAAGTTTCCATTTCAAAAATCTTCTGTTTCTTCTATTCCTTAA 942 0.3301 MIFVLKAESLVFADQRLSIVYPVIQKFKSLITSDPLGVTKTWIGSDICNYKGFYCDHPPDNNSAIALASIDFNGAFPIAVLGMKSLTFLDIRFNFFSGGVPQQIFTQNLEVLFINNNLLTQNLPENLGISSSTHIFLLTLANNKFMGPIPRNLPKALSSLSEVVLLNNELTGCLPHEIGYFQEAIVFDVGNNQLTGPLPFSLSCLEKVEVVNLASNMFYGMVPEVVCAELVNLVNFSLSDNYFTHVGPFCRMLIQRGVLDVGKNCIHDLPFQRSMEECAQFYAQPRMCPFMWFHSFILPCKFPFQKSSVSSIP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00430 313 Gene3D Ribonuclease Inhibitor 22 280 IPR032675 -
Tsu01g00430 313 PANTHER BNAA09G53810D PROTEIN 7 74 - -
Tsu01g00430 313 PANTHER BNAA09G53810D PROTEIN 72 312 - -
Tsu01g00430 313 SUPERFAMILY L domain-like 25 268 - -
Tsu01g00430 313 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 74 - -
Tsu01g00430 313 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 72 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00430 Tsu-Chr1 3622396 3623499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00430 9 285 Leucine-rich Repeat extension Gene Families AT3G24480 35.455 8.86e-60 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00430 01 3622396 3623499 Tsu01g00430 01 3622396 3623499 ECH