Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00428 ATGGAAGCAGGAGAAGATTGCTGTGTTAAAGTTGCAGTTCATGTTCGACCATTAATCAATGATGAGAAGCTTCAAGGTTGTAAAGATTGTGTAACTGTTGTTTCAGGGAAACCTCAGGTACAAATTGGCGCGCATTCCTTTACATTTGATCATGTTTATGGGAGCAATGGTTCTCCCTCATCGGCCATGTTTGACGAATGCGTTGCTTCCCTTGTTGGTGGTTTGTTCCAAGGATATAATGCCACTGTTCTCGCATACGGTCAGACAGGTTCCGGAAAAACATACACAATGGGCACTGGCTCTAAAGATTATTATCAAACGGGAATAGTACCCCAAGTTATGAGTTcattgtttagtaaaattgagACCTTAAAGCATCAGACTGAATTTCAGCTGCATGTTTCCTTTATCGAGATTCTTAAAGAAGAAGTAAGAGATTTGCTGGACCCATCCTCTATGAACAAATCAGATACTACAAATGGACATGCAGGGAAAGTGACTATTCCTGGTAAACCGCCAATACAAATTCGCGAGGCTTCAAATGGCGTCATTACCCTAGCAGGGTCTACTGAAGTCAGTGTTGCAACACTAAAGGAAATGTCTGCTTGCCTAGAACAAGGATCGTTGAGTAGAGCAACTGGGAGTACAAATATGAATAACCAATCCAGTCGTTCACATGCCATCTTCACCATCACATTAGAGCAGATGCGGAAGCCTAACAGCCCTAGTGAGAACGGCTTAAATGATACCATGAATGAAGAGTATCTCTGTGCTAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGATCTGATGGTTTGCGTTTTAAGGAAGGAATTCACATTAACAAAGGCTTACTAGCACTCGGCAATGTGATTAGTGCACTCGGTGatgaaaaaaagagaaaagaaggCGTTCATGTTCCTTATAGGGATAGTAAACTTACCAGACTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTCGTCAATAGAGATCCAATGTCCAGTGAGATGCTTAAAATGCGACAACAACTAGAGTATTTGCAAGCAGAACTTTGTACTCGTTCTGGCGGCTCTTCCGAGGAGGTTCAGGTCCTCAAGGAAAGAATTTCTTGGCTTGAAGCAGCTAATGAGGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATCTTCTGTTGCAGTGCAAAGTGAAAAGGATACTTATGATGGTAGCATGTGCAATACAAAGACCGATGGACTTAAAAGAAGCTTACCTTTCACAGCTTCTGATTATCCTATGAGTGAAGCAACAGGAGATTCAAGGGAAATTGAAGAAGTAGAAAAAGAGTGGGAGCATACGCTGCTGCAAAATAGTATGGACAGAGAGTTACACGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCTTTGGAGTATCGGATGCGGAAGCATTCAAGCAGCACTTTGGAAGGAAGATCATGGAACTTGAGGATGAGAAGAGAACTGTCCAGCAAGATAGGGATCGTCTTTTGGCCGAAGTTGAAAATCTTGCTGCCGGTACTGATGGACAAACACACAAATCAGAGGATATCTATGCCCAAAAATTAAAAGCACTTGAAGCTCAGATTCTGGATATGAAGAAGAAACAGGATAGTCAGGTTCAGCTTctaaagcaaaagcaaaaaagtGACGATGCGGCAAAGCGCCTGCAAGATGAAATACAATCTATAAAAGCGCAAAAGGTTCAATTGcaacaaaagataaaacaagAGGCCGAACAGTTTCGGCAGTGGAAGGCCTCTAGAGAGAAAGAGCTGTTGCAATTAAagaaagaaggaagaagaaacgaGTTTGAAAGGCATAAGCTGCAAGCTCTAAATCAGCGCCAGAAAATGGTCCTTCAGAGGAAAACTGAGGAAGCTGCAATGGCCACCAAGAAGTTAAAGGAATTGTTAGAAGCTCGTAAATCTTCCAACCGAGACACATCAGTTACCATGAATGGTGGAACAAATAAACAGGGCAATGAGAAGTCCTTGCAACGGTGGCTTGATCACGAGCTAGAAGTCATGGTAAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAAAGCCAAGTGCGGGCTGCTCTTGCAGAGGAGTTAGCAATGCTGAGACAAGTAAACGAGCTTGTTGCCAATGGTCTCAGTCCTCCAAAAGGGAAGAACGGATTTGCTAGAGCATTCTCCATGTCACTAAATGCACGAATGGCCAGAATAGCTTCACTAGAGAACATGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTATCTGAGGCAGAAGAACGAGAACGGGCTTTCACTAACCGTGGACACTGGAACCAGTTGCGCTCAATGGGAGAAGCCAAAGTTTTGCTTCAATATATGTTCAATTCTCTTGCAGACACTAGGTGTCAAATGTGGGAGAAGGACATGGAGATAAGAGAAATGAAAGATCAAATCAGGGAACTTGTAGGTCTATTACGGCAAAGCGAAATCAAGAGAAAGGAAGTTGAGAAGGAACTAAAAGTTAGAGAGCAAGATGTTGCAACTGCATTGGCGAAGCCAGCTTCAGGAAATTCTCCAAATTCATTGAAACACTATGCTGAAGACATCAAGGAACCTTTATCTCCGGAGTCTGTGCCAGCACCGAAACAGCGCAAATATACACCAGGCATTGCTAATGGCCAAGTGAGGGAATCGGCAGCATTTATAGATCAAACTAGAAGGATGGTACCCATTGGGCAATTGTCGATGAAAAAACTAGCAATTGCAGGACAAGCTAATGGCAAGCTATGGAGGTGGAAAAGAAGCCATCATCAGTGGCTAGTACAATTCAAATGGAAGTGGCAGAAGCCATGGAAACTTTCTGAACGGATTCGAAACAGTGACGAGACAATCATGAGATCAAGGCCACGTTCACAAACTTTACctcaaattaagtga 3084 0.415 MEAGEDCCVKVAVHVRPLINDEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSNGSPSSAMFDECVASLVGGLFQGYNATVLAYGQTGSGKTYTMGTGSKDYYQTGIVPQVMSSLFSKIETLKHQTEFQLHVSFIEILKEEVRDLLDPSSMNKSDTTNGHAGKVTIPGKPPIQIREASNGVITLAGSTEVSVATLKEMSACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKPNSPSENGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSEMLKMRQQLEYLQAELCTRSGGSSEEVQVLKERISWLEAANEDLCRELHEYRSRSSVAVQSEKDTYDGSMCNTKTDGLKRSLPFTASDYPMSEATGDSREIEEVEKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGVSDAEAFKQHFGRKIMELEDEKRTVQQDRDRLLAEVENLAAGTDGQTHKSEDIYAQKLKALEAQILDMKKKQDSQVQLLKQKQKSDDAAKRLQDEIQSIKAQKVQLQQKIKQEAEQFRQWKASREKELLQLKKEGRRNEFERHKLQALNQRQKMVLQRKTEEAAMATKKLKELLEARKSSNRDTSVTMNGGTNKQGNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLRQVNELVANGLSPPKGKNGFARAFSMSLNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGHWNQLRSMGEAKVLLQYMFNSLADTRCQMWEKDMEIREMKDQIRELVGLLRQSEIKRKEVEKELKVREQDVATALAKPASGNSPNSLKHYAEDIKEPLSPESVPAPKQRKYTPGIANGQVRESAAFIDQTRRMVPIGQLSMKKLAIAGQANGKLWRWKRSHHQWLVQFKWKWQKPWKLSERIRNSDETIMRSRPRSQTLPQIK 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00428 1027 Coils Coil 403 423 - -
Tsu01g00428 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 394 IPR027417 -
Tsu01g00428 1027 Coils Coil 860 901 - -
Tsu01g00428 1027 Gene3D Kinesin motor domain 2 391 IPR036961 -
Tsu01g00428 1027 MobiDBLite consensus disorder prediction 151 172 - -
Tsu01g00428 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1026 - -
Tsu01g00428 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1026 - -
Tsu01g00428 1027 MobiDBLite consensus disorder prediction 1008 1027 - -
Tsu01g00428 1027 CDD KISc_KIF4 7 364 - -
Tsu01g00428 1027 Coils Coil 566 586 - -
Tsu01g00428 1027 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g00428 1027 Coils Coil 530 550 - -
Tsu01g00428 1027 MobiDBLite consensus disorder prediction 693 714 - -
Tsu01g00428 1027 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu01g00428 1027 Coils Coil 490 510 - -
Tsu01g00428 1027 Coils Coil 671 691 - -
Tsu01g00428 1027 Coils Coil 597 638 - -
Tsu01g00428 1027 MobiDBLite consensus disorder prediction 695 714 - -
Tsu01g00428 1027 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g00428 1027 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g00428 1027 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g00428 1027 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g00428 1027 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu01g00428 1027 Pfam Kinesin motor domain 15 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00428 Tsu-Chr1 3605915 3613766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00428 9 389 Miscellaneous Gene Families AT5G06670 37.084 1.04e-53 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00428 01 3605915 3613766 Tsu01g00428 01 3605915 3613766 ECH
Tsu01g00428 01 3605915 3613766 Tsu07g00930 07 7645355 7658567 PCT