Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00427 ATGATGGCATCAACTGTTATGGATTTAGTCAATAATACGTTAGATTGGGTGACTTATGCTTTAGATGCTCCTTCTGCACGAGCTGTAGTTTTTGGATTCAATATTGGTGGACATTTATTTATCGAAGTTTTACTTCTGGTGGTCATACTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAAAGACCCTTGACAAACAAgGAAATTGATGAACTATGTGATGAATGGGTTCCACAGCCCCTTATTCCTTCTCTTAATGAAGAGATGCACTATGAACCACCAGTGTTGGAGAGTGCTGCTGGGCCACATACCATAATTAATGGCAAAGAAGTTGTAAATTTTGCTTCAGCAAACTATCTTGGACTTATAGGTCATCAAAAGTTACTTGACTCATGTTCCTCTGCTTTAGAGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGGTTTTATGGGACAATTGATGTCCATCTTGACTGTGAAGCGAGAATAGCAAAATTCTTAGGAACACCTGATTCAATTCTGTACTCTTATGGACTTTCTACCATGTTCAGTGCTATTCCTGCTTTCTCTAAAAAAGGAGATATAATTGTGGCGGATGAGGGAGTCCACTGGGGAATACAGAATGGCCTTTATCTTTCTAGAAGCACAGTGGTATATTTTAAGCACAATGACATGGATTCTTTAAGAGAAACTTTAGAGAAAATTACTACCAAATATAAGGGGACCAAAAATTTGAGGCGTTATATTGTCGTTGAAGCTCTTTACCAGAATTCTGGCCAAATAGCACCCTTAGACGAGATCAttaaattgaaggaaaaatatCTTTTTCGTATTTTAATGGATGAGAGCAACTCGTTTGGTGTGCTTGGAAGTTCTGGAAGAGGTGTCACTGAACACTATGGAGTACCGGTTGAGAAGTTAGATCTTATAACTGCTTCTATGGGACATGCATTGGCTACAGAAGGAGGATTCTGCACCGGAAGTGCAAGAGTTATAGATCACCAACGGTTGAGTAGCTCTGGCTACGTCTTTTCTGCTTCTTTGCCTCCATATCTTGCAAGTGCTGCAATTTCAGCCATTGATGTCCTTGACGAAAATCCCAATCTGTTAACAAAGTTGAAGAACAACATCGCTGTGTTATGGAAAGGGTTATCGAATATACCAGGCTTCACAATTGCAAGTCATCCAGAGTCTCCAATTGTTTATTTGAGATTAAAGAAGTCAACCGGTTCTTTGAAAGATGACCTACATCTGCTTGAAAATATTGCCGAGCGTGTTTTGAAGGAAGATTCTGTATTTGTGGTGGCTTCTAAAAGATCAACATTGGACAAGTGTAAATTGCCTGTAGGAATTAGATTGTTTGTTTCTGCAGGGCATTCAGAATCTGATCTTCACAAGGCATCTGAATCATTGAAAAGGGTTGCGACATTAGTCCTCGGTCGTCATAGTTGA 1455 0.3924 MMASTVMDLVNNTLDWVTYALDAPSARAVVFGFNIGGHLFIEVLLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPQPLIPSLNEEMHYEPPVLESAAGPHTIINGKEVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLRETLEKITTKYKGTKNLRRYIVVEALYQNSGQIAPLDEIIKLKEKYLFRILMDESNSFGVLGSSGRGVTEHYGVPVEKLDLITASMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAISAIDVLDENPNLLTKLKNNIAVLWKGLSNIPGFTIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVFVVASKRSTLDKCKLPVGIRLFVSAGHSESDLHKASESLKRVATLVLGRHS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00427 484 SUPERFAMILY PLP-dependent transferases 83 476 IPR015424 -
Tsu01g00427 484 Coils Coil 226 246 - -
Tsu01g00427 484 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 4 481 - -
Tsu01g00427 484 Pfam Aminotransferase class I and II 111 472 IPR004839 GO:0009058|GO:0030170
Tsu01g00427 484 Gene3D - 126 367 IPR015421 GO:0003824
Tsu01g00427 484 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 4 481 - -
Tsu01g00427 484 Gene3D Aspartate Aminotransferase, domain 1 105 470 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00427 Tsu-Chr1 3586587 3592299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00427 2 336 Acyl Lipid Metabolism Gene Families AT4G36480 77.910 0.0 570