Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00426 ATGACTCAGTGGTTACATATACATGTTGCTGTAGTAGCAGCTTCAATTGGATGTTTTTCAatccttttgtttgttttcatttggAGGTTATGTCATCAGAagaaagatgaaaagaaatttgTTGAATCAAATAGTTTGACCAGAATAGAGAGCCAtgaaaggagaaagaaaaaaggTAATATTTATGGAAGAAAAGATTTGTTCAGCTGGATTGATCATCCTTATCTAGCTTCTGATGCTGTAGAAAATGGATGGTCAAGATTTGCTTTCATAATCTATAATAGTAGCATTTCAATgtcatcaaaaaaatcaacttcATCAACCCTTTTAGGAGCATGTGTTAGTGTTGAAAATGGAATAGAAAATGAGGCTGAGATAAGTTGGGAAGTGTGTCAAGGATCAAATGAATTCATGCAGAAGATAAGACTTAATCCTGGTTTGAAAATGTGTCAAAACAATACTTCTACTACAAGTGTTGCTTCTGTTATTAGGACTTCTTTGCCTCTTCCTGGTCCTTCTTTAGGGAACCATGCATTTCCACAAGAAGCTTATTTTGAAATCACTATATTGTATTCTTATGGTGGAGATGATCATGAATTGGTAGGAAGAAAAGAAGGGGAGAAAACTAAACTACTCATTGAAGATAGTTCAAATGATGAAGGTGATTTgaaaagtgttgaagaaatgAAAGTTGAAGGAAAAGAAAGTGGGAAAAGTGGATCTGTGATGTTGTCATTGGGGTTAACTGCTGGAGAAAGTGTTCCTTTAAGAGTTCCAGGAACTTACCCTAGAAGCATAGGGTTCAACTCCAATGGTTCTGTTTTTCTTGATGGAATGAAACTTGTATTTGAGTCAGACAAAGCACAATGGATAGGAACTGATACAGTAATTGGTTGTGGATTTGATCCAAGGAAAAAGAAAGTTTTCTTCACATTAGACTCAGAATTGGTGCATGTAATTCACTGTCAAACAGAAGAATACAGCACTCCACTGTATCCAACTTTGACTGCAAATATAGACATTATGGTTTTAGTTAATTTTGGACAAATTGCATTCAAATATGCTCCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCGCCACTTGTACATTCCCCTGGTGCTACTCTTGGCTTTGATGACAGTAAGGAACTATTTTCCATGGGAAGGATTGATTCGCCGTGGCAAAATCAATCTGCAAGGAAAGGAAATAACAACAATGGGAATAATAACAATCTagcatttgattttgatgaggaGTCTGAAgctgatttatttgaaatagtgTTGGATGGTTCAGAAAAATCACCATACTCGGTGTCATTATCATAG 1338 0.3251 MTQWLHIHVAVVAASIGCFSILLFVFIWRLCHQKKDEKKFVESNSLTRIESHERRKKKGNIYGRKDLFSWIDHPYLASDAVENGWSRFAFIIYNSSISMSSKKSTSSTLLGACVSVENGIENEAEISWEVCQGSNEFMQKIRLNPGLKMCQNNTSTTSVASVIRTSLPLPGPSLGNHAFPQEAYFEITILYSYGGDDHELVGRKEGEKTKLLIEDSSNDEGDLKSVEEMKVEGKESGKSGSVMLSLGLTAGESVPLRVPGTYPRSIGFNSNGSVFLDGMKLVFESDKAQWIGTDTVIGCGFDPRKKKVFFTLDSELVHVIHCQTEEYSTPLYPTLTANIDIMVLVNFGQIAFKYAPANAQRTPNPCFIAPLVHSPGATLGFDDSKELFSMGRIDSPWQNQSARKGNNNNGNNNNLAFDFDEESEADLFEIVLDGSEKSPYSVSLS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00426 445 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 6 441 - -
Tsu01g00426 445 CDD SPRY_RanBP_like 228 348 IPR044736 -
Tsu01g00426 445 PANTHER RAN BINDING PROTEIN 9-RELATED 6 441 - -
Tsu01g00426 445 Gene3D - 129 362 IPR043136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00426 Tsu-Chr1 3582458 3584551 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00426 01 3582458 3584551 Tsu01g00426 01 3582458 3584551 ECH
Tsu01g00426 01 3582458 3584551 Tsu07g00931 07 7666627 7669444 PCT