Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00425 ATGTATTCTCTGTGCCTCCAAAACGCAACAACATTACACGCTCTCCACTTTCCCTCCAACCTaacttcttctcttcttttcccaATCAATAATCACAAATTATCCTCAAAAGCCCGTTTCCAATGCTccatcaaaaccaacaacacaAACACCAAACAAGTCACTAACAAAAAGGTTCTAATCCTATGGGACCTCGATAACAAACCTCCACGTGGACCTCCATACAACGCTGCACTCTCTCTCAAAACCCTAGCAGAAAGCTTCGGCGACGTCGTTTCAATCTCCGCATACACAATACGACACTCCTTCTTCAACCTCCCTCAATGGCATCGCGACAAAAACCCTAACCCCAATACCTTGCTCTGCCGTGTATGCGGCCATCAATGCAGATCGATTTACGATCTCAATGTTCATTTCGAGAAAGTTCATCTTTATCAGCATCATAAGTGGCTGAAACGATTGAGTAAGGTTAAATTTAGTCGCCACAAGGTTGGGTTTATTCGTAAGAGGCATATTCATAATGAGGCTGCGAGGACTATTGCTCCGCCTAGGGTTGGATTTGGATTGGCTAAGGAGTTGCGGCGTGCCGGTGTTTTTGTGAAGATTGTGGAAGTTGGTGATAAGGTGAATGCTGCTGATTCGTCTTTGAAGAGGGAGATTATGAGTGGAGGTGTTGATTGGTTGATTTTGGTTTCCGATGATTCGGAGTATTCAGAGATGTTGAGGGAGGTGAGGGAGATGAAATTGgggaatgttgttgttgttggagaTTATTGGGATAGGTATTTAGGGAGGAATGCTGATTTGTGGCTTCCTTGGAATGTTGTTGAGAATGGAAAGGTTGAGGAAATGATGAATTTGATGGGAAGAAAAACATTAACAGAGGGTTTGGATGATgaattggaagaagaagaagacgatGAGAATGTGGATGATgaattggaagaagaagatgggttttatgtttattaa 972 0.3807 MYSLCLQNATTLHALHFPSNLTSSLLFPINNHKLSSKARFQCSIKTNNTNTKQVTNKKVLILWDLDNKPPRGPPYNAALSLKTLAESFGDVVSISAYTIRHSFFNLPQWHRDKNPNPNTLLCRVCGHQCRSIYDLNVHFEKVHLYQHHKWLKRLSKVKFSRHKVGFIRKRHIHNEAARTIAPPRVGFGLAKELRRAGVFVKIVEVGDKVNAADSSLKREIMSGGVDWLILVSDDSEYSEMLREVREMKLGNVVVVGDYWDRYLGRNADLWLPWNVVENGKVEEMMNLMGRKTLTEGLDDELEEEEDDENVDDELEEEDGFYVY 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00425 323 MobiDBLite consensus disorder prediction 295 323 - -
Tsu01g00425 323 MobiDBLite consensus disorder prediction 298 323 - -
Tsu01g00425 323 Coils Coil 297 317 - -
Tsu01g00425 323 ProSitePatterns Zinc finger C2H2 type domain signature. 122 143 IPR013087 -
Tsu01g00425 323 PANTHER - 33 319 - -
Tsu01g00425 323 CDD PIN_LabA-like 130 257 - -
Tsu01g00425 323 PANTHER OS06G0166200 PROTEIN 33 319 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu01g00425 Tsu-Chr1 3576087 3577654 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00425 34 320 C2H2 Transcription Factor Family AT5G52010 41.587 5.31e-71 224
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00425 01 3576087 3577654 Tsu01g00425 01 3576087 3577654 ECH