Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00416 ATGGGTACCAAACAACCAAATGGAGATTATCTATTGTTGAAGGCACATGAAGCAAGTGTTGTGGATTTAGTGAGTCTCTTGTTTTCATCAAATTTatcaaatagaaaatttattgaTTGTCCACAAGGACTTGAGGCAAGATTATTTCGACAAAGATGGCTTCTCTTTACTTCTGTTGTTGTACAAAAGATTCTTGTTGCCATAGATCCCTTTATGAAAATGTTAGGAGACATGTTGGAGTTGTTTCTCAATCGTGTGTCAAGTAATGGAGGGTTTGTTAGGCTCTTCTTCAACTTTCTTAAAGGAAAGATGATAACACCGGAAAGGTCATCGGCGGAATTCTTATCGGTGGTGGGGCATCTTGACACAAGAGTTGATTTAGACAAAACTATTGATCATAAGGATGCTAAGTACAAAGGTTTACTATCTATCATGGCTTCTAAATTTTCATATGAGAATGAACAATTCATTAGCAACGCAGTTACAAATCATTGGGGTATGAAATTTTTGGGGTTATACAGCTTTTGGAACGATTACCAAAAGCATGAGTCCACAAAAGCCATAATAGTGCAAGATACAAAATCTGAACCCAACTTGATTGTGGTTGCATTTAGAGGCACAACTCCATTTGATGCTGAGCAGTGGAAAACAGATGTGGATATCTCATGGTATGACCTACCAAACGTGGGTAGGTTACATGGGGGGTTCATGAAAGCATTGGGCCTTCTGGAGAACGGTGGATGGCCCAAAGAAATAGATGAAAGTGGCAAACATCGATATGCTTACTACACAATTAGAGAAAAGCTGAGAACAATGTTGAGGGAAAATGAGGATGCAAAATTCATTTTGACAGGGCACAGTTTGGGAGGAGCATTGGCTATTCTGTTTGTATCAATGCTTATATTCCATGAGGAAGAAGTGTTGTTGGATAAGTTAGAAGGTGTTTATACATTTGGGCAACCAAGAGTAGGAGATGAAATGTTTGGAGAGTTCATGAAAAGCAAGTTGAAAAAGTATGATGTGAGGTATTTGAGATTTGTTTATGGTAATGATATGGTTCCTAGGATCCCTTATGATGACAAATCCCTCTTCTTTAAGCACTTCAGTCCTTGCCTCTATTTCAACAGCTTTTACCAAGGGCAGATTCTAGAGGAGGAGCCAAACAAGAATTATTTTTCTGTCTTCTGGGTGATACCCAAAATCTTAAATGCAGTTTGGGAGGTGATTAGAGGCTTCCTTCTACCTTTAGTTATAGGTATAGAGTATAAACAAAATTGGTTCATGATTGTGTTCAGGCTAGTTGGATTGGTAATTCCAGGACTACCAGCTCATTCCCCGGAAAATTACGTCAATGCTGCCCGGTTGGGATCGTTAAATGAAAATCTAGAGCTTCCAAATTCTAAAGATGACTAA 1413 0.3822 MGTKQPNGDYLLLKAHEASVVDLVSLLFSSNLSNRKFIDCPQGLEARLFRQRWLLFTSVVVQKILVAIDPFMKMLGDMLELFLNRVSSNGGFVRLFFNFLKGKMITPERSSAEFLSVVGHLDTRVDLDKTIDHKDAKYKGLLSIMASKFSYENEQFISNAVTNHWGMKFLGLYSFWNDYQKHESTKAIIVQDTKSEPNLIVVAFRGTTPFDAEQWKTDVDISWYDLPNVGRLHGGFMKALGLLENGGWPKEIDESGKHRYAYYTIREKLRTMLRENEDAKFILTGHSLGGALAILFVSMLIFHEEEVLLDKLEGVYTFGQPRVGDEMFGEFMKSKLKKYDVRYLRFVYGNDMVPRIPYDDKSLFFKHFSPCLYFNSFYQGQILEEEPNKNYFSVFWVIPKILNAVWEVIRGFLLPLVIGIEYKQNWFMIVFRLVGLVIPGLPAHSPENYVNAARLGSLNENLELPNSKDD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00416 470 Gene3D alpha/beta hydrolase 132 398 IPR029058 -
Tsu01g00416 470 Pfam Lipase (class 3) 201 360 IPR002921 GO:0006629
Tsu01g00416 470 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 462 - -
Tsu01g00416 470 SUPERFAMILY alpha/beta-Hydrolases 143 392 IPR029058 -
Tsu01g00416 470 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 6 462 IPR044819 GO:0004806|GO:0006629
Tsu01g00416 470 CDD Lipase_3 142 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00416 Tsu-Chr1 3460340 3464123 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00416 5 469 Acyl Lipid Metabolism Gene Families AT1G56630 53.416 0.0 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00416 01 3460340 3464123 Tsu01g00416 01 3460340 3464123 ECH