Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00414 ATGGTGATCGCCGACTCCGACTACGAAGGAGCCGCTATCCAATCCCTCGGTTCTCTCTTCAATGTTACTCAAGTCTTTCTCTGGGATGACGGTGTCCAGGTTCAACCATCGTCTCAATCTGTTCACAACAATCACAAATCAAATCCCATTCCTGATTGGagtgaaattattattatgccTGAGGATTTGGAATTGAACAAACAAATGAATGAATTGGGTCTTCCTCTCTCATTTCAGGCAAATAAGAAGGAGAAATGTGGACCagtaaaaggaaaaaagaagggTGCACGTTCCAAGCTGCCACGTACTTGTAACAATCCTGGGGATGAAACTCTAAATGAAGTGAGTGCAGATGAGGTCATATCTCCTGCTAAATTTCATGATAAAACTAACAGTTCATTATCTTGTATATCAATGCTGGGCCAAAGTGAACCGTCCTGTGATGGTGCAGTGGAAGTTGACACGGCCCGATCTGTCTCTGGTGAAGGAGATAATTCAACAGACTGCAATGAGTTTGCTAATGGTGTTTCCGTAGAGAAAATTAATAGTAGAAATAATGCAGAAACTAATGATGCCCAGAATAATGACTTTGATTTGAAAAGGGCACATGCCTCAGATACTGGAGTCTCTGCTGGAAGCCACTTGACAGGTACTGGTGTCAATTTCTGTGGGATAGAACTGGGTAAAGTTGACAATGAATGTTTAGAACTTTCACCAATTGTTTGCAACAATACAGATTGTGAGACTATTTGCAATGATGATGGTGCTTCCACGTGGCAGCCACCAGCTAATGAATCAGAATCAATTCCCATGAGTTTGGATGGGATTGGATGTGACAGAGTTGATGGGTCAAATGATTGCGGTGAATTTGGAGATTGGATGGTGTTATGGGATACTTTCTATGGGAGAAGCTACTTCTACAATGTTAAAACAGACACTTCTACATGGGACCCACCCCCAGGGATGGAGCATCTAGCATTTGGCGGGTGTACTGAATTAGATGATAGTGAAGCTTTAAAGTCGTCCGAGGAGTGTGAAACACAAAGGAGCATTAAACCACTTGAAGAAACCTTAGTAGACGAGAACTTATCTGGAAATCAACATGAAGAGTATTCAGCCGAGATTGGAATCGCTGCTGGAAATTTGGTCTCTGATACTGCTACAAATAATGAAGACAAATCTCTTCATCATTCAGATGAGAATCTTGAAAACGGTGGAGTTTCATGCTGCTCTGTATCAAATACCCTGGATCATATTGTTagCACTAACGATAGGTGCAGTCAAGCAACATCAGAGGTCAATCATACACCAATGGAAGACATGGTCATTGATACGCCTGGGTTGGATAGTAAATCTGATCATTTCATGtcaaaacagcaaaagaaagTGAAAAGGAAACACAGGCGGAAGAAATTATATTATGAAAATGAAGAGCTCCAATTTCAAAAAATGCCTGATGCTTATTCTGCAACAATTGAAAAGTATTGGTGTCAGAGGTATATTTTATTCTCTAGATTTGATGATGGTGTAAATATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGGTTATTGCTCATTATCAAGCTTCACGTTGTGCAAGCGGCACGGTCATTGACTGTTTCACCGGTGTTGGCGGGAATGCTATTCAATTCGCACAACGGTGCAATCATGTGATTGCAATTGATATTGATCCTTTGAAGATTGGTTTTGCTAGGCATAATGCTGCAATATATAGAGTGGATGATCTAATTGACTTCATAATTGGTGACTTCTTCGTCTTGGCATCAAAGTTAAAGGCTGATACTGTTTTCTTATCTCCACCTTGGGGTGGACCTGATTATGCGAAGGTTGAAACTTATGATATGAAGACAATGCTTAGACCGCATGATGGATATACTCTGTTCAATGTTGCTAAGGAGATTGCTTCAAGAGTTGTCATGTTCCTTCCAAGAAATGTCAATTTCAACCAATTGGCAGAGTTATCTCTATCTGCTTGTCCACCATGGTCGCTAGAGGTGGAGAAAGTTCATTTAAATGGAAAATTGAAAGCGATCACAGCTTATTTCAGTCGTACACCAGTTGGAGGGTGCTGA 2097 0.3996 MVIADSDYEGAAIQSLGSLFNVTQVFLWDDGVQVQPSSQSVHNNHKSNPIPDWSEIIIMPEDLELNKQMNELGLPLSFQANKKEKCGPVKGKKKGARSKLPRTCNNPGDETLNEVSADEVISPAKFHDKTNSSLSCISMLGQSEPSCDGAVEVDTARSVSGEGDNSTDCNEFANGVSVEKINSRNNAETNDAQNNDFDLKRAHASDTGVSAGSHLTGTGVNFCGIELGKVDNECLELSPIVCNNTDCETICNDDGASTWQPPANESESIPMSLDGIGCDRVDGSNDCGEFGDWMVLWDTFYGRSYFYNVKTDTSTWDPPPGMEHLAFGGCTELDDSEALKSSEECETQRSIKPLEETLVDENLSGNQHEEYSAEIGIAAGNLVSDTATNNEDKSLHHSDENLENGGVSCCSVSNTLDHIVSTNDRCSQATSEVNHTPMEDMVIDTPGLDSKSDHFMSKQQKKVKRKHRRKKLYYENEELQFQKMPDAYSATIEKYWCQRYILFSRFDDGVNMDEEGWFSVTPEVIAHYQASRCASGTVIDCFTGVGGNAIQFAQRCNHVIAIDIDPLKIGFARHNAAIYRVDDLIDFIIGDFFVLASKLKADTVFLSPPWGGPDYAKVETYDMKTMLRPHDGYTLFNVAKEIASRVVMFLPRNVNFNQLAELSLSACPPWSLEVEKVHLNGKLKAITAYFSRTPVGGC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00414 698 Pfam WW domain 292 319 IPR001202 GO:0005515
Tsu01g00414 698 Gene3D Vaccinia Virus protein VP39 486 695 IPR029063 -
Tsu01g00414 698 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 20 692 - -
Tsu01g00414 698 Pfam RNA cap guanine-N2 methyltransferase 537 692 IPR019012 GO:0001510|GO:0008168|GO:0009452
Tsu01g00414 698 CDD WW 291 321 IPR001202 GO:0005515
Tsu01g00414 698 Gene3D - 291 327 - -
Tsu01g00414 698 SMART ww_5 288 321 IPR001202 GO:0005515
Tsu01g00414 698 MobiDBLite consensus disorder prediction 85 111 - -
Tsu01g00414 698 ProSitePatterns WW/rsp5/WWP domain signature. 293 319 IPR001202 GO:0005515
Tsu01g00414 698 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 498 656 IPR029063 -
Tsu01g00414 698 CDD AdoMet_MTases 537 618 - -
Tsu01g00414 698 SUPERFAMILY WW domain 291 320 IPR036020 GO:0005515
Tsu01g00414 698 ProSiteProfiles WW/rsp5/WWP domain profile. 293 321 IPR001202 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00414 01 3441307 3449248 Tsu01g00414 01 3441307 3449248 ECH