Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00410 ATGGATTCAACTTTCATTTACATCATTGTCCTCTTTCTTCTTACCTTATTTTCATTTAAGTTctttccaaaacaaaaaaatagaaaaaaccaAACAAGTGCAAAGCTTCCTCCTGGTTCAATGGGATGGCCTTACATAGGACAAACCCACCAACTCTACTCTCAAGAcccaaattttttcttcttgtcCAAACAAAAAAGgtACGGAGAAATATTTAAGACGAACATCCTAGGATGTCCATGTGTGATGTTGGCAAGTCCAGAAGCTGCACGTTTTGTGCTTGTGACACAATCTCACTTATTTAAACCAACATATCCTAAAAGCAAAGAACGTTTGATTGGTCCTAGTGCTTTGTTTTTTCACCAAGGTCACTACCACTTACGTTTGAGGAAGCTTATTCAGAAGTCTCTCTCCCTTCATTCACTTCGCAACTTGGTTCCTCATATTCAAGCTTCAGCCATTTCAACTATCAAATCTTggggtgatgatgatgatggattcaTCATTAACACTTTTAAGGAAATGAAAAAATTTTCATTTGAAGTTGGTATCCTCAAGATTTTTGGAAATCTAGAGCCAAGGTTGAGGGAAGAGctaaagaaaaattattggATTGTTGACAAAGGTTACAATTCATTTCCAACTCAAATTCCTGGTACACAATACAAAAAAGCACTATTGGCAAGAGAGAGACTTGGAAGTATTTTGAAGGAAATAATTaatgagaggaagaagaagaatttgGTTGAAAGTGAAAGAGATCTTTTAAGCTGTTTATTGAATTGGAAAGGTGAAGGTGGAGAAATGTTATGTGATGATGAAATTGGAGATAACATTATTGGAGTTCTTTTTGCTGCTCAGGATACCACAGCTACTGTCATGACTTGGGTGATCAAGTACTTGCATGATGAACCTAAACTTTTGGAGTGTGTAAAGGCTGAGCAGATGgcaattcaaaaagaaaataatgataaaCTACAGCTGAGTTGGAATCAAACTAGAAACATGCCAATTACCTATAAGGTTGTGTTAGAGAGCATGAGGATGGCAAGTGTTATATCATTTCCTTTTAGAGAAGCAGTAGCTGATGTAGAGTACAAGGGATTCCTAATACCAAAAGGGTGGAAAGCAATGCCATTGTTCAGAAATATTCATCACAATCCAGAATTTTTTCCAGATCCTCACAAATTCAACCCTTCAAGGTTTGAGGTTTCACCAAAGCCAAATACTTTCATGCCATTTGGTAGTGGAGTACATGCTTGTCCTGGCAATGAGCTTGCTAAGCTGGAGACACTGATTATGATCCATCATTTGGTTACCAAGTTTAGGTTGGAAGTGATAGGATCACAATGTGGGATTCAATATGGCCCATTTCCACTGCCTTTGAATGGACTCCCAGCCAGGTGTTGGAGAGAATCTACCAGCAGCATCTTGTGA 1437 0.3479 MDSTFIYIIVLFLLTLFSFKFFPKQKNRKNQTSAKLPPGSMGWPYIGQTHQLYSQDPNFFFLSKQKRYGEIFKTNILGCPCVMLASPEAARFVLVTQSHLFKPTYPKSKERLIGPSALFFHQGHYHLRLRKLIQKSLSLHSLRNLVPHIQASAISTIKSWGDDDDGFIINTFKEMKKFSFEVGILKIFGNLEPRLREELKKNYWIVDKGYNSFPTQIPGTQYKKALLARERLGSILKEIINERKKKNLVESERDLLSCLLNWKGEGGEMLCDDEIGDNIIGVLFAAQDTTATVMTWVIKYLHDEPKLLECVKAEQMAIQKENNDKLQLSWNQTRNMPITYKVVLESMRMASVISFPFREAVADVEYKGFLIPKGWKAMPLFRNIHHNPEFFPDPHKFNPSRFEVSPKPNTFMPFGSGVHACPGNELAKLETLIMIHHLVTKFRLEVIGSQCGIQYGPFPLPLNGLPARCWRESTSSIL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00410 478 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 470 - -
Tsu01g00410 478 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Tsu01g00410 478 PANTHER CYTOCHROME P450 26 8 470 - -
Tsu01g00410 478 SUPERFAMILY Cytochrome P450 32 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 Gene3D Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00410 478 Pfam Cytochrome P450 37 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00410 Tsu-Chr1 3399715 3403435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g00410 1 473 Cytochrome P450 AT3G19270 63.080 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00410 01 3399715 3403435 Tsu02g03338 02 37359585 37362776 ECH
Tsu01g00410 01 3399715 3403435 Tsu01g00410 01 3399715 3403435 ECH