Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00366 ATGATGCAAGGAAGCTTGAGAAATGCAAGTAAAGGTGGAAAATCTTCAAGCATAGAAAGAAAGTTGGCATTGCAACAAGATGTAGATAGGTTGAAGAAGAAGCTTAAGCATGAGGAGAATATTCATAGGGCATTGGAGAGAGCTTTTAATAGACCTTTAGGAGCTTTACCTCGTCTTCCTCCTTATCTACCACCATATATACTAGTACTTCTGGCTGAAGTGGCAGTTTTGGAAGAGGAAATTGTTAGGCTTGAAGAGAAAGTTGTGTATATCAGGCAGGATTTGTATCAAGAAGCTGTCTACATATCATCTTCTAAGCCTAAATTGGAGCATTCACCTCTTCCAAACAATTCAAACATATCAGCAACAACAATGGATAGTCCTAAATTGGATACATTGAAGTCTCTTTCACAAACAGTTGATAATCCAGCTGCAACATCTGCAACTAGGCCTACCATACCACTCCAAGAGAATAGACAAGGAAAAGAGAATAAATACTGCACTAGTTCTTTCAAGAAAAGGCTGCAACCCTCCAAAGAAATGAGTAAAACTCCAATTAAAAATCTTCATGTGGACAATAAGTCATTGAATAAAAGGGCGCATCCTCCGAGAAGGAAGAAAGAACCAAGGGTAAAAGATCAGCAAATGGCAGAACTAAGTCATCCTAGTCCACAACAAATGTTACCAGAAGCTGACTGTCCAAATGTGATTTCTGAAAATATTCTAAAGTGCTTGTCAAGTATTCTCTTGAGAATAAGTGCTGTGAAGAATCCAGGTTCTGCGGGCGACATATCATCACCCTTATGGACTCAAAAACCTCAAAACCATACTGAAGGACCGGAGTTTTGGGATCCGTACAGTATCTGTCTGGAATTTGGAAAGAGGGATATTGGTCCCTACAAGCATTTATGTGCAATTGATGCTAAATCTTTCAATGCAAAACGAACCACAAGCACTTTGTTTTTACTGCACCGGTTGAAACTTCTTTTTAGGAAGCTAGCTTCTGTCAACTTGGAGAACCTCAACCATCAGGAGAAGCTTGCATTTTGGATCAACACCTATAACTCATGTATGATGAATGCATTCGTAGAGAATGGCATACCGGAGAGTCCTGACATGGCCGTGGCAATGATGCGGAAGGCAAAAGTAAATGTAGGCGGACACATACTTAGTGCAACAACCATAGAGCATTTCATTTTAAGACTCCCTTATCACTACAAATTTACGTTTTCAAAGGGAGCGAAAAATCATGAAATGGTAGCCAGAAGCAAATACGGGCTTGAACTGTCAGAACCCCTAGTGACATTTGCTCTCTCTTGTGGAACTTGGTCTTCTCCTGCTGTGAGAGTTTACACAGCATCCCAAGTGGAGAATGAACTAGAAGCTGCCAAAAGAGAGTACTTACAAGCAACAATTGGAATTTCAACATCCAAGTTTGCTATCCCAAAGCTTTTGGATTGGTATATACAGAACTTTGCAAAAGACTTGGAATCATTGATGGATTGGATCTGCCTTCAATTACCAAGTGAATTAGGGAAAGAAGCTATTAAATTGcttgagaaaagaaaaactgaGCCCCTCTCACAATTTGTACAAATCATGCCATATGAGTTCAGCTTTAGATACCTGCTTTGCACATAA 1641 0.3937 MMQGSLRNASKGGKSSSIERKLALQQDVDRLKKKLKHEENIHRALERAFNRPLGALPRLPPYLPPYILVLLAEVAVLEEEIVRLEEKVVYIRQDLYQEAVYISSSKPKLEHSPLPNNSNISATTMDSPKLDTLKSLSQTVDNPAATSATRPTIPLQENRQGKENKYCTSSFKKRLQPSKEMSKTPIKNLHVDNKSLNKRAHPPRRKKEPRVKDQQMAELSHPSPQQMLPEADCPNVISENILKCLSSILLRISAVKNPGSAGDISSPLWTQKPQNHTEGPEFWDPYSICLEFGKRDIGPYKHLCAIDAKSFNAKRTTSTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINTYNSCMMNAFVENGIPESPDMAVAMMRKAKVNVGGHILSATTIEHFILRLPYHYKFTFSKGAKNHEMVARSKYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEAAKREYLQATIGISTSKFAIPKLLDWYIQNFAKDLESLMDWICLQLPSELGKEAIKLLEKRKTEPLSQFVQIMPYEFSFRYLLCT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00366 546 Coils Coil 453 473 - -
Tsu01g00366 546 MobiDBLite consensus disorder prediction 139 175 - -
Tsu01g00366 546 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g00366 546 PANTHER TRANSCRIPTION FACTOR 3 545 - -
Tsu01g00366 546 Pfam Protein of unknown function, DUF547 339 468 IPR006869 -
Tsu01g00366 546 Pfam Leucine-zipper of ternary complex factor MIP1 19 98 IPR025757 -
Tsu01g00366 546 Coils Coil 67 94 - -
Tsu01g00366 546 Coils Coil 21 48 - -
Tsu01g00366 546 MobiDBLite consensus disorder prediction 139 229 - -
Tsu01g00366 546 PANTHER EXPRESSED PROTEIN 3 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00366 Tsu-Chr1 3104505 3107854 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00366 01 3104505 3107854 Tsu01g00366 01 3104505 3107854 ECH