Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00347 ATGGCTTCCTCTACTCTCTCAACTCCCTCTCCCAATAACTATTTCCTCAAACACCAATCAAAACTCTCCACGTCATCAAACCGTTTCAAATCCGCCACCTTCCTCCCACCAATCAAATCCTCCGTTTCAAATCCACCACCGTCTCTCTCAACCTCACCACCACCACACTCAACCAAACTTCCGATCCGTAAAATCCCCGGCGATTACGGCATCCCTTTCATCACTCCTTACAAAGAACGCCAAGACTATTTCTACAACCAAGGTCGTGATGAATATTTCAAATCCAGAATCCAAAAATATCAGTCAACAATTTTCCGAACAAATGTTCCTCCCGGTGGTTTCATCGCTCAGAATCCAAACGTTATCGCTTTACTCGACGCTAAAAGTTTTCCTATCCTCTTTGATACTAACAAAATCGATAAAACTGATGTATTCACCGGAACTTATACTCCGTCAACTGAACTCACCGGAGGTTATAGAGTCTTATCTTATCTTGATCCATCTGATCCTAAACATACTCAGCTCAAAAACCTTATGTTTTTTCTACTTAAAACTCGCCGGAACCACGTGATCCCGGAGTTTCGATCTTGTTATAATGAGCTTTTTGGTATGGTGGAGAATGAGCTTGCTAAAAGTGGAAAAGCAAGTTTTGGTGATGCTAATGATCAGGCTGCTTTTAATTTCTTGAGTCGTTCTTTGTACGGTGTTAACCCCGTTGACACCGAACTTGGACTTGACGGCCCAAAAATGGTTCAGAAATGGGTTTTGTTTCAGTTAGGTCCAGTTTTAAAATTGGGCCTACCGAAATTTTTGGAAGATTCCATGATTCATAATTTTCGTCTTCCGTTTAAACTTATTAAGAAAGATTACCAGAGATTGTATGATTTCTTTTATAATGCTTCGGGATTTGCTCTCGATGAGGCAGAGCGTTTGGGCGTTTCGAGAGAGGAGGCTTGTCATAATTTATTGTTTGCTACGTGTTTTAATTCGTTTGGTGGATTTAAGTTATTTTTCCCGAATGTGATGAAATGGATTGGACGCGGTGGTGTGAGGTTGCATACTAAGCTTGCGACGGAGATTAGAGAGGCAGTTAGGGCTGCGGGCGGGGAGGTTACTATGGCGGCAATGGAGAATATGCCGTTGATGAAATCAGTGGTTTATGAAGCTTTTCGTATTGATCCACCGGTTCCATTACAATTTGGAAGAGCGAAAAGGGACATGGTAATTGAGAATCATGAGAATAGTTTTTTGGTGAAGAAAGGGGAATTGTTATTAGGGTATCAACCATTTGCGACTAAGGATCCTAAGGTTTTCGATAGACCTGAGGAATTTGTCGCGGATAGGTTTGTTGGCGATGAAGGTGAGAAATTGTTGAAACATGTGATTTGGTCTAATGGACCTGAAAATGAATCTCCAAGTGTTAAGAATAAACAATGTGCCGGTAAAGATTTCACAACCTTGGTTTCTAGGCTTTTGGTTGTTGAACTTTTTCTTAGGTATGATTCCTTTGAGATTCAAGTTGGAAATTCTGCTTTGGGTACTTCTATTACCCTCACCTCTCTAAAGAGAGCaagtttttaa 1581 0.4086 MASSTLSTPSPNNYFLKHQSKLSTSSNRFKSATFLPPIKSSVSNPPPSLSTSPPPHSTKLPIRKIPGDYGIPFITPYKERQDYFYNQGRDEYFKSRIQKYQSTIFRTNVPPGGFIAQNPNVIALLDAKSFPILFDTNKIDKTDVFTGTYTPSTELTGGYRVLSYLDPSDPKHTQLKNLMFFLLKTRRNHVIPEFRSCYNELFGMVENELAKSGKASFGDANDQAAFNFLSRSLYGVNPVDTELGLDGPKMVQKWVLFQLGPVLKLGLPKFLEDSMIHNFRLPFKLIKKDYQRLYDFFYNASGFALDEAERLGVSREEACHNLLFATCFNSFGGFKLFFPNVMKWIGRGGVRLHTKLATEIREAVRAAGGEVTMAAMENMPLMKSVVYEAFRIDPPVPLQFGRAKRDMVIENHENSFLVKKGELLLGYQPFATKDPKVFDRPEEFVADRFVGDEGEKLLKHVIWSNGPENESPSVKNKQCAGKDFTTLVSRLLVVELFLRYDSFEIQVGNSALGTSITLTSLKRASF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00347 526 PRINTS E-class P450 group IV signature 432 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00347 526 PRINTS E-class P450 group IV signature 416 430 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00347 526 PRINTS E-class P450 group IV signature 479 497 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00347 526 PRINTS E-class P450 group IV signature 379 395 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00347 526 MobiDBLite consensus disorder prediction 36 59 - -
Tsu01g00347 526 PANTHER CYTOCHROME P450 26 43 524 - -
Tsu01g00347 526 MobiDBLite consensus disorder prediction 40 54 - -
Tsu01g00347 526 Pfam Cytochrome P450 354 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00347 526 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 43 524 - -
Tsu01g00347 526 Gene3D Cytochrome P450 56 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu01g00347 526 SUPERFAMILY Cytochrome P450 61 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00347 Tsu-Chr1 2893994 2895918 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00347 01 2893994 2895918 Tsu01g00347 01 2893994 2895918 ECH