Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00344 ATGGCTATTGACACTCCTCTACTAGACAACACTAACAACAACTCTTCTAGTGTTGTTGATCATGAGGAAGAGAAGCCACTGAAAATTGTTCACAAATTTGGTGTTGAGTCAAAGAAGATATGGAAAATAGCTGGTCCAGCAATTTTAACTGCTTTATCTCAATTCTCACTTGGTGCACTCACTTCTACATTTGTTGGTCATGTTGGTGAGCTCCAACTTGCTGCCTTTTCTGTTGAAAACTCTGTTATTGCTGGGTTTGCCTTCGGTTTCTTGTTGGGTATGGGAAGTGCCTTGGAGACATTATGTGGCCAAGCATTTGGTGCTGGTCATATAAGGATGATGGGAGTTTACATGCAAAGATCATGGATTATCTTGTTGACTGCTGCCCTTATAATGTTACCATTTTATATTTGGGCATCTCCCCTCTTGAAGCTCGTTGGACAGACCGATGAGATTGCAGAGGCTGCTGGCACATTTGCTAGATGGATGATACCACAATTATTTGCATATGCTTTGAATTTTCCAATCCAAAAATTCTTACAAGCACAAAGGAAAGTCCTTGTAATGTTATGGATATCAGCATCAGTTTTGGTTTTCCATGTAATTATAAGTTGGCTTCTAATATTGAAACTTGGATGGGGCTTAGCTGGAGCTGCAGTTTCTCTTAACACATCATGGTGGCTTATTATAATTGCCCAACTTATGTACATTTTCATCACTAAATCAGATGGTGCTTGGAATGGATTCTCATGGCTAGCATTTGCtgatttgtttaattttgtcaaactttCTTTAGCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTACTTGATGATATTGGTGGTGATAACAGGACATTTGACAAACCCTCTAATACCTTTGGATGCCATAGCTATTTGTATGAACATAAATGGTTGGGATATCATGATCGCTCTAGGGTTTAATGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGAGCAGGTGATTTTAAGGCTGCAAAATTCTCAGTGATAGTGGTTTCCCTGACATCAATATTCATAGGTGTTGTTGCCATGATCATAGTACTAACAACAAGAGATTACTTTCCTCAATTGTTTACATCAAGTGAGGCGGTTGCCGAGGAAACAACTAAACTTGCTGTCTTGCTTGGTTTCACCGTTCTTCTAAACAGCCTTCAACCAGTCTTGTCTGGTGTTGCTGTTGGAGCTGGATGGCAATCTCTTGTAGCATACATCAATCTTGGATGCTACTATATTGTTGGATTACCAGCAGGGATATTGTTGGGTATCACATTTGGTTTTGGAGCAGAGGGTATTTGGTCAGGTCTAATTGGAGGAATAGCCATGCAGACTATAATCCTTATAATCGTCACTTCAGTTACCAACTGGAAAAAAGAGGCTGATGAAGCAGAAAGCCGTGTGAAGAAGTGGGGAGGAGCAATTGCATATGAAAATTGA 1464 0.3941 MAIDTPLLDNTNNNSSSVVDHEEEKPLKIVHKFGVESKKIWKIAGPAILTALSQFSLGALTSTFVGHVGELQLAAFSVENSVIAGFAFGFLLGMGSALETLCGQAFGAGHIRMMGVYMQRSWIILLTAALIMLPFYIWASPLLKLVGQTDEIAEAAGTFARWMIPQLFAYALNFPIQKFLQAQRKVLVMLWISASVLVFHVIISWLLILKLGWGLAGAAVSLNTSWWLIIIAQLMYIFITKSDGAWNGFSWLAFADLFNFVKLSLASAVMLCLEFWYLMILVVITGHLTNPLIPLDAIAICMNINGWDIMIALGFNAAISVRVSNELGAGDFKAAKFSVIVVSLTSIFIGVVAMIIVLTTRDYFPQLFTSSEAVAEETTKLAVLLGFTVLLNSLQPVLSGVAVGAGWQSLVAYINLGCYYIVGLPAGILLGITFGFGAEGIWSGLIGGIAMQTIILIIVTSVTNWKKEADEAESRVKKWGGAIAYEN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00344 487 TIGRFAM matE: MATE efflux family protein 46 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g00344 487 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g00344 487 Pfam MatE 46 206 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g00344 487 Pfam MatE 267 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu01g00344 487 PANTHER PROTEIN DETOXIFICATION 33 21 473 - -
Tsu01g00344 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 473 - -
Tsu01g00344 487 MobiDBLite consensus disorder prediction 1 17 - -
Tsu01g00344 487 CDD MATE_eukaryotic 36 469 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00344 Tsu-Chr1 2818020 2822805 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00344 01 2818020 2822805 Tsu01g00344 01 2818020 2822805 ECH