Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00331 ATGGATTCCAACAAAGAAACTTCGGCAATGAAGATTCGGAGGAAGTTGTCGTTAAGGGCAAAAGAGAACAATAAAATTAGAGAAAGAAGCAGGCGAGCCATAACAGCAAAGATATTCAGTGGACTTCGAGCTCAAGGGAACTACAATTTGTCGAAGCATTCCGACAACAACGAGGTCCTCAAAGCTCTATGTGAAGAAGCTGGTTGGTTGGTCGAAAAAGACGGAACCACCTATCGCAAgGGTAACCATGCAGGCACCTCCACCAGAACCGCCCCTTTCTCTTGTAACCAAAATCCAAGGCCTGTTTTTTCACCCTTTCCAACTCCAATTCCTTTAAACCAATTCACTTCTCTGTCTTATCCTCCATTATGGATATCAAACAGTGCACCTGTAACACCTCCTCTCCACTCACCAACAAACATCAAACCAATTCCAACATGGGATTCTAATTCCAAACAAGCTATGGCTTTTTTCAATTACCCTTTGGTTGCATCTTCTACCTCTGCTAGCCCCATTTCTGATCAGTCAATTAAGTTCCAACCTTTTGCTCAATCTTCATTTGCAGTGCCAAGTTCTTCATCTTTCAATGTTGTGGCTGATAAATCAATTAGAGAGATGGGAAGTTCAGCAATGCTTGGGATGCAAGTAAAGCCTTGGGTTGGGGAGAAGGTTCGTGATGAAGGATTGGATGATTTGGTGGAACTCACCCTTGGAACTGGGAAATCAAGGAGTTAA 735 0.4299 MDSNKETSAMKIRRKLSLRAKENNKIRERSRRAITAKIFSGLRAQGNYNLSKHSDNNEVLKALCEEAGWLVEKDGTTYRKGNHAGTSTRTAPFSCNQNPRPVFSPFPTPIPLNQFTSLSYPPLWISNSAPVTPPLHSPTNIKPIPTWDSNSKQAMAFFNYPLVASSTSASPISDQSIKFQPFAQSSFAVPSSSSFNVVADKSIREMGSSAMLGMQVKPWVGEKVRDEGLDDLVELTLGTGKSRS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00331 244 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 113 175 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tsu01g00331 244 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 173 243 - -
Tsu01g00331 244 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 116 - -
Tsu01g00331 244 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 113 175 - -
Tsu01g00331 244 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 108 IPR008540 -
Tsu01g00331 244 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 173 243 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tsu01g00331 244 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 116 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00331 Tsu-Chr1 2691716 2693050 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Tsu01g00331 BES1_N 1.6e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00331 01 2691716 2693050 Tsu01g00331 01 2691716 2693050 ECH
Tsu01g00331 01 2691716 2693050 Tsu07g00354 07 2654322 2656447 PCT