Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00283 ATGGAGTTCGGAGCTACAACAGCGATGCTAACAAAGAAACTATCTAACAACTACAGCGTTTCCGGAAGATCTGCTTACGACGGCGTTTTCGCTACTCCTATCAAGCTAAGAGCTCAAAGCTTTTCTCAATCTGATGATTACAACGAGATTTTCGGTAGCTCCGGAGCTTCTTCTTCGATTCCGATTCTCGAACTTCCGGAGCTGAAAGAGAGGAGAGTAATGACGGAAGATGTTCGTCACTCGAAGCTCGATTACTCGAATGTCTTCGGCGGTTTCGAGAATCTAGAAGCTGCTGTGCCGCTTGAGGAGGTGGTTGTGAAAACTAAAGAGAAAAGTAGTTTCACAAACGGAAAAGCGAAACGGAGCAAAGTCAAAAGTGGGGAACAATCTAGGAGCAAAGTCAAAAGTGGGGAACAATCTTTCCGGGAAGATCGTGCTAATTCTTCACAGGAAATTCCGGCGGTATTGCCTTCATTCGATGGTGCCAAAAAGATCAATATGTCATATCATAAAGTTAGCCAAGGAAATGAAAATGGAACAAATGGGACAACACATATAGCTCAACTCCATGCTGTTCCTGCTTACACTCGTTTAATTGAAGAAGTCGATTCAGTGAAGATGAATGGAGCTAAAAAGTCAACACCAGCACCAGTATCACAAGATGCTTATTCTGGTAGTCATTGTGGTGAGGGGATAAAAGAAGGCGGGCATTCTGCTAAATCATTTGTCGATCCTTCACCTAATAATGCCAAGAAACAATCTTCCAACAATGGAGGGAAAGATATAAATAGATCCGAGTCCGACTCTGTTGACCTGTTTTATGATGCATGCGAGATTACCCATGGAAGTGATGGAATTCATGAAGTCAAAGCTCCTCCTTCACAGACTGTGACAGCTAATTtggatgataataataataataataacaataataataacgtTGATGCTTCAAGATCAATGGCAACCAACTGCCAAACATCTAAAAGTGGCAGATATGACAGTCCTGCTGGTGCCGATTCGCCAACATACTTAGAGGACACGGTTGACTCAAATTCAGCTGCAGCAGCTTCTGTAGCTGCTTTAAGGAAGGCAATAGAAGAGGCTCAAGTAAGAATAAAGGTTGCAAAAGAATcaatgagaagaaagaaagaaggctATCCTGATCGTGTCAAACAGAAGTCTAGTATTGACTTGAAAGTCAGAGAAAAAAAGGAAGCTAAACTTGCATACAAAACAACGAAAGTTAAAGAGATTAATACAAGGCAAACATTTGGAGAAATGGATGCTTTAATGCCAATGAGAACAGAGAAAGTAAGATCAGATATTGGGGATAAAGAAACGCGTACTGCCAACGAAGCTGTACAAGAAGCACAGAAGAAATTGTCTCAAGCAGAACATAAGGAAAGTGTTGAACTGAAAGAAGCAGATCAGAAAGGAAAAGATCTTGAGCTTAAAGAGGCAGGAAATGCTAAGAATGTCCCATATGATAGGAATGCTTCTGAAAAACCAGAAGAATCCGATCATTCAGTAGAAATGGTTAAGGAATATTTGGAACGGGAGAACTATAAAGAAGAAGTCTGTGCAGATAACGAAGAAGGTCCTAGTGAAGAACTTGTCCATGAAACTAAGCATAGGTGTCAAGAAGTTGTTGGTGAAACAATACTGATTCGGGAGACACTTGACAGTGGGGGGACAGACACAAGATTGAAGGTTAAAGAAGTTGAGAACAAGGTTACACCGTTTAATGAACCAACAGGCCATGTGATTAACCTAGGTGGGAAGCCTTCGATGACaggaaataaagaaaatattggCTGTAAGCCAGAAGATGGTAAGAAGGCTAAATGGTCCATTGATCCGGAAGAATGCCAAAAAATATTGAGAGCTATTCAGGAACTGGGAAAAGGTGAGAAACACATTTCTCAAGAGCAAAAAGAAAGTGATGGTGAAGTTGAAGTGATCGATGAGCTGGAAGAATGTGCATTGACAGAGTCTCCGGAGCCAACAGACAGTGAGGGACTGTGCAGTCCTGATCGTTCAGAATTAATAAGCAcggaaaaagaaatatataactCGGGGTGTTTAGAGgacaaaaagagaaggaataCATCTGGTTTTTTGGATGTAAATCAAGAGGTAGAACATTCCTATTCTCGAGAAGCCAATGACAGTACATTTAGTGATATCCATCTGCAGGAAATACTGGAGGATATTGTTGACCATATTCACGATGATGAAGAGATTTACGAAAGAAATACAAAGGCTTGTGATTTAGGTGGACATGTGAGGCTTCAAGATGCCCATGATCGTGAAAATGAAATTGAGGGAGCCACACATCtgatggaagaaaatgagatgGAAAGGGAAGATAACAAGGGGCTAGAAGAAATTATAGAGACTGAAACTGATCCAATTTATGAAGAGATAAGAGCAGAGGAATCTGGCATCGACACAGAGCCCAGTTCTAGCTATGAGTCAGATGAAACTGAGAAATTGAGCAAAATTCAGGTTTCTAATACAGtaaatgaaaatgatgaaaCTCTTGAAGTAACTCCGGAGTTTTATTCATGTGATCTGCAGGATGATATAACAGTAGCAGCAAGTAATGCTTCAATACAACATCAAGAAAAATACGAAGAGCCAGAATCTGTTCAAGAGACTAATGATTTCTGTGAGAAATATGCAGGCCAGATTTCGTCCTTTGATCAAGGTGCCCCTGTACTCAGTGAAACAGTGTATCAAATGAAAAATACATTTGAAACAGTTATCACTGAAGATGATTCTACAAATGTTGGTGAAACTGACATGAAGGTTAGACAAAATCAAGATCAGTGTTTGGAAAAGGTAGAATCTGATTGTGATTTGGCTATGCTTGTTGAAGAAACAACTCATGGGTGTATAGAAATATGTAAGGATGTGAAGGAGGCTAGAGTTGTGTCAGATGAAGAGATCGATGAGAATAGATCTAACTCCTCTAGCGAGGAAATGTTATTTGACAATGGACATGATATAGAAGCATCCCAGATACCTAGTATGTCTGAATGGAAAGAAAACCCTTTCAAAGAAGAGGAGGTTAAATCAATTCACAGAAATATAGAGGAGAGTCATCAAGCATTCATGACAGTGGAAGAGAAGAAAGCCAATGGTAAGTCACAAAAGGTAGAAGTGGATAAGGAACTCCTCAAGAAAATTGATGAAGCAAAAGctagagaaagagaaaaggaGAAATTAGCTGTAGAAAGAGCTATTCGTGAAGCTCGTGAAAGGGCATTTGCTGATGCAAGAGAAAGGGCAGCTTTGGAGAGAGTTGCAGCTGAAGCACGTCAAAAGAACATTTTGAATGGACGAGAACGGCTAAAAGCCACTAGTCAGGCAACTGAGAAAACACCGGCTGAGAAGGCTGCTATAGAAGCAAAAATTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCAAGATCACGTGCCCTGGAGAGGGCACTGTCCGAGAAGGCTGCTTCTGATGCAAAAAATAAATCTGACAAGTCTGTTGCAGAGAAACACGGTGCTTCAAGAGGTAATGAAACAAAGCAACATTCAAAGTCTTTCAGCTATGGAGTTCACGATTCTGCCGAGGCCTTTGATGGAGCTAATGCTGACTCTGCACAGAGATGTAAAGCTAGATCTGAGAGGCATCAGAGAATAGGGGAACGTGTGGCAAAGGCTCTTGCAGAAAAGAGTATGCGTGATCGGCTTGTGCAGAAAGAACAAGAGGagagaaatAGGGTAGCTGAAGTTCTCGATGCCGATGTTAAAAGGTGGTCTAGTGGGAAGGCAGGGAACTTGAGAGCATTGCTTTCGACATTACAATATATCCTTGGGCCCGATAGCGGCTGGCAACCAATTACTTTAACAGAAATAGTAACCACACCTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTGCGTGCATCCTGACAAGCTGCAGCAGCGAGGGGCTAGCGTTCAGCAAAAGTACACTTGTGAGAAGGTTTTTGATCTTCTAAAGGAAGCTTGGAACAGATTCAACATGGAAGAAAGGTGA 4071 0.3992 MEFGATTAMLTKKLSNNYSVSGRSAYDGVFATPIKLRAQSFSQSDDYNEIFGSSGASSSIPILELPELKERRVMTEDVRHSKLDYSNVFGGFENLEAAVPLEEVVVKTKEKSSFTNGKAKRSKVKSGEQSRSKVKSGEQSFREDRANSSQEIPAVLPSFDGAKKINMSYHKVSQGNENGTNGTTHIAQLHAVPAYTRLIEEVDSVKMNGAKKSTPAPVSQDAYSGSHCGEGIKEGGHSAKSFVDPSPNNAKKQSSNNGGKDINRSESDSVDLFYDACEITHGSDGIHEVKAPPSQTVTANLDDNNNNNNNNNNVDASRSMATNCQTSKSGRYDSPAGADSPTYLEDTVDSNSAAAASVAALRKAIEEAQVRIKVAKESMRRKKEGYPDRVKQKSSIDLKVREKKEAKLAYKTTKVKEINTRQTFGEMDALMPMRTEKVRSDIGDKETRTANEAVQEAQKKLSQAEHKESVELKEADQKGKDLELKEAGNAKNVPYDRNASEKPEESDHSVEMVKEYLERENYKEEVCADNEEGPSEELVHETKHRCQEVVGETILIRETLDSGGTDTRLKVKEVENKVTPFNEPTGHVINLGGKPSMTGNKENIGCKPEDGKKAKWSIDPEECQKILRAIQELGKGEKHISQEQKESDGEVEVIDELEECALTESPEPTDSEGLCSPDRSELISTEKEIYNSGCLEDKKRRNTSGFLDVNQEVEHSYSREANDSTFSDIHLQEILEDIVDHIHDDEEIYERNTKACDLGGHVRLQDAHDRENEIEGATHLMEENEMEREDNKGLEEIIETETDPIYEEIRAEESGIDTEPSSSYESDETEKLSKIQVSNTVNENDETLEVTPEFYSCDLQDDITVAASNASIQHQEKYEEPESVQETNDFCEKYAGQISSFDQGAPVLSETVYQMKNTFETVITEDDSTNVGETDMKVRQNQDQCLEKVESDCDLAMLVEETTHGCIEICKDVKEARVVSDEEIDENRSNSSSEEMLFDNGHDIEASQIPSMSEWKENPFKEEEVKSIHRNIEESHQAFMTVEEKKANGKSQKVEVDKELLKKIDEAKAREREKEKLAVERAIREARERAFADARERAALERVAAEARQKNILNGRERLKATSQATEKTPAEKAAIEAKIKAERAAVERATAEARSRALERALSEKAASDAKNKSDKSVAEKHGASRGNETKQHSKSFSYGVHDSAEAFDGANADSAQRCKARSERHQRIGERVAKALAEKSMRDRLVQKEQEERNRVAEVLDADVKRWSSGKAGNLRALLSTLQYILGPDSGWQPITLTEIVTTPAVKKAYRKATLCVHPDKLQQRGASVQQKYTCEKVFDLLKEAWNRFNMEER 1356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00283 1356 SUPERFAMILY Chaperone J-domain 1213 1352 IPR036869 -
Tsu01g00283 1356 Coils Coil 1133 1162 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 110 157 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 242 263 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 110 145 - -
Tsu01g00283 1356 PANTHER AUXILIN-LIKE PROTEIN 1 640 - -
Tsu01g00283 1356 PANTHER AUXILIN-LIKE PROTEIN 637 1356 - -
Tsu01g00283 1356 ProSiteProfiles dnaJ domain profile. 1292 1356 IPR001623 -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 442 510 - -
Tsu01g00283 1356 Coils Coil 358 378 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 209 266 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 296 333 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 1132 1190 - -
Tsu01g00283 1356 Gene3D DnaJ domain 1228 1356 IPR036869 -
Tsu01g00283 1356 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 640 - -
Tsu01g00283 1356 Coils Coil 1069 1089 - -
Tsu01g00283 1356 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 637 1356 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 442 487 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 1107 1197 - -
Tsu01g00283 1356 Coils Coil 447 474 - -
Tsu01g00283 1356 MobiDBLite consensus disorder prediction 296 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00283 Tsu-Chr1 2333753 2339883 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00283 01 2333753 2339883 Tsu01g00283 01 2333753 2339883 ECH
Tsu01g00283 01 2333753 2339883 Tsu07g00352 07 2645155 2649868 PCT