Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00272 ATGATGGCTACATCTAGTGGAAACTCTAGTGTGTCAACAAAATGTCAAAGCTATGGATCTGAGGAAGATTTGCAAGTTCTTATGGATCAAAGAAAGAGGAAGAGAAAACAATCGAATCGCGAATCGGCAAGAAGATCAAGGATGAGGAAGCAGAAACACATGGATGATTTAATGCTTGAGGTGGAAAGACTGAGAAATGAAAACAATGAAATCATGACAAGGATGAACATGACAACACAACACTACCTAAAATTTGAGGCAGagaattgtgttttaagggcACAAATGGTTGAACTTAATCAAAGGTTACAATCATTgaatgatatcatcaacatcatcaacacaaCTACTATTACTAATGGagttaattatcaaaataatgattgttttttaacaatttcagaTAATTGCttcatgaatcaaatgaatATGTCTTATCTTAATCAACAACCAATTATGGCCTCTGCAGACATGTTTATGTGGTAA 486 0.284 MMATSSGNSSVSTKCQSYGSEEDLQVLMDQRKRKRKQSNRESARRSRMRKQKHMDDLMLEVERLRNENNEIMTRMNMTTQHYLKFEAENCVLRAQMVELNQRLQSLNDIINIINTTTITNGVNYQNNDCFLTISDNCFMNQMNMSYLNQQPIMASADMFMW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00272 161 PANTHER BZIP TRANSCRIPTION FACTOR 2 159 - -
Tsu01g00272 161 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Tsu01g00272 161 PANTHER BZIP TRANSCRIPTION FACTOR 44 2 159 - -
Tsu01g00272 161 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g00272 161 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Tsu01g00272 161 Pfam bZIP transcription factor 31 84 IPR004827 GO:0003700|GO:0006355
Tsu01g00272 161 Gene3D - 29 84 - -
Tsu01g00272 161 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Tsu01g00272 161 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Tsu01g00272 161 MobiDBLite consensus disorder prediction 1 54 - -
Tsu01g00272 161 Coils Coil 47 74 - -
Tsu01g00272 161 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00272 Tsu-Chr1 2252549 2253848 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g00272 bZIP_1 2e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00272 01 2252549 2253848 Tsu01g00272 01 2252549 2253848 ECH