Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00270 ATGGGTGCAGCTTGTTGTGTTGCTGCAAAGGATCGTAGTATTACTAACAGAACTGGAGGTGAAAGTTTGCATAGAGATCTCACACGTTCACCGTCATGGAGTTTTCGGTGGGATAGTCTGGGGCGTGTTGCTGATGAAGTTCATAATCCTTCCTATCCCACGTCTCATGTATTCAGCAGAAATACCAGCATGGAGTTTAAAGGCTCACTAAGTTCTGAAAGAGGTAATATATCTGATGGGGGAAGCATGCTGGACAATTCTGCAACTATTTCGGTGAAGTCCCCTGTCAGTGAGGCATTGGCTGCAAACATAATGACACCATCTTCTGATTTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAATCCAGGGGAATCTTCAATACCAAATCATTCATTTTCAATACCTTCAGTTTTCTCAACACCTATAGCAGGTCCTTTATCTAATCATGGTTATCAACATCTTCCCAACTCTACCCCAACAAGATCTGCACATCGATCTCTAGGACACCCACTGTTGAGACAGGTTTCTGATAATCAAATCATGGGTCTAAAATCACCAGACAGCTCAATTTATGAAGGAAGGGTATCATTTGTACTCTCGACTTGCAGCAATGAAATTGAAGCAGTATCCCAATGTGGATCGTCTGATGGTTGGTCGATGCACACCTTTTCTGAGCTGGTGGCCTCCTCACAAAGGGGGAGGTGGTCTTTTGACAGCGAGTGTTTTGGCTCGGGTCGTCGCAAGATAAGTGGATCCAGCAGCAGGCTGTCATATTCACCTTCCATGGATCTACAATCTTGTGGGACTTGCACAAGGCTTTTGTCCGACAAATCAGCATGGGGCAACCACAAATTTATTGGCAACAGTGACCTCTCAGTTGTTGCCGTACTAATATGTGGTCATGCATTTCATGCAGATTGCTTAGAGACTATGACTGCAGAGGCAGATAAGTATGATCCATCGTGTCCAATTTGTATGGCTGGCGGTGATAAGCACTTTTCGAAGTTGTCAAGAAAAGGTTTTCGAGCTGAAGCAGAGATGAAGGCCAAGAACCACAAGATATCCAGAAATCGTGTAGTTGATAGCTACCTTGATGGtggttttgatgtttttgatcgCCAAAAAGATATTGAATTGGGAggaaaaatttcaaagatggaGGCTAGCTCCAGTACAAGGAGCTCAGTTGGAAAGCCTTTCTTGAAGAAGCACTTTTCACTTGGGTCAAAGTGGAACCGATCTTTGTCTGAGAATGATTCTGCCAGAAAGAAAGGCTTTTGGGCAAGATATAAAAAAGATTGA 1308 0.4243 MGAACCVAAKDRSITNRTGGESLHRDLTRSPSWSFRWDSLGRVADEVHNPSYPTSHVFSRNTSMEFKGSLSSERGNISDGGSMLDNSATISVKSPVSEALAANIMTPSSDLSMSSNFSTVVKNPGESSIPNHSFSIPSVFSTPIAGPLSNHGYQHLPNSTPTRSAHRSLGHPLLRQVSDNQIMGLKSPDSSIYEGRVSFVLSTCSNEIEAVSQCGSSDGWSMHTFSELVASSQRGRWSFDSECFGSGRRKISGSSSRLSYSPSMDLQSCGTCTRLLSDKSAWGNHKFIGNSDLSVVAVLICGHAFHADCLETMTAEADKYDPSCPICMAGGDKHFSKLSRKGFRAEAEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIELGGKISKMEASSSTRSSVGKPFLKKHFSLGSKWNRSLSENDSARKKGFWARYKKD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00270 435 PANTHER EXPRESSED PROTEIN 1 429 - -
Tsu01g00270 435 SUPERFAMILY RING/U-box 268 329 - -
Tsu01g00270 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 329 IPR013083 -
Tsu01g00270 435 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 429 - -
Tsu01g00270 435 ProSiteProfiles Zinc finger RING-type profile. 269 327 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00270 Tsu-Chr1 2237928 2240431 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00270 01 2237928 2240431 Tsu01g00270 01 2237928 2240431 ECH