Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00261 ATGGAAACCAACTCAGTTTCCAAGCTTTTGTTACTGTTCTTCACTGTCTTCTTTCTTAGTTCTGAGTTTACTCAATGTAGTGTTACATATGATAGAAAAGCTCTTCTCATCAATGGACAAAGAAGAATCCTCATTTCTGGTTCCATTCATTATCCAAGAAGCACCCCAGAAATGTGGGAGGATCTGATTCAGAAAGCTAAAGATGGAGGGTTAGATGTTATTGACACTTATGTGTTTTGGAATGTTCATGAACCTTCTCCTAGTAATTACAATTTTGAAGGAAGGTACGATCTAGTACATTTCATTAAGACAGTGCAGAAAGTGGGTCTCTATGTACATCTTAGAATTGGTCCTTATGTTTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGAATCAGTTTCAGAACTGATAATGGCCCTTTTAAGgCTGCAATGGAAGGTTTTACTCGGAAGATTGTTGAGATGATGAAGAATGAAAAGTTATTTCAGTCACAAGGTGGTCCAATAATTCTTTCTCAAATTGAGAATGAGTATGGCCCACAAGGAAGAGCACTTGGAGCTTCTGGTCATGCATATTCAAATTGGGCTGCAAAAATGGCAGTTGGATTGGGTACAGGTGTTCCTTGGGTGATGTGTAAGGAAGATGATGCTCCAGATCCAGTGTTAAATGCTTGCAATGGTTTTTACTGTGATGATTTCATTCCCAATAAACCATACAAGCCTAAACTATGGACTGAGTCTTGGAGTGGCTGGTTTTCAGAATTTGGTGGACCACTTCCCCAGCGACCAGTTCAGGATCTAGCTTTCGCGGTTGCTCGTTTCATTCAAAAGGGTGgctcattttttaattattacatGTACCACGGAGGAACTAATTTCGGACGATCAGCTGGAGGACCATTCATAACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGTTAAGGGAACCTAAATATGGTCATTTGAAGGACCTTCATAAAGCTATCAAGCAATGTGAACATGCTTTGGTTTCTTCAGATGCTAAGGTTACATCATTAGGAGCATATGAACAGGCATATGTATTCTCTTCAGGAACAACATGTGCAGCTTTTTTAGCAAACTATCATTCAAATTCTGCTGCAAGAGTGACCTTCAACAATAGGCACTATGACTTACCTGCTTGGTCCATAAGCATCCTCCCTGATTGTAGAACAGATGTTTTCAACACTGCAAGAGTGAGGTTTCAACCTTCACAAATACAAATGTTGCCTAGTACTTCTAAGTTGTTCTCATGGGAGACCTATGATGAAGATGTATCTTCCCTTGCGGAAAATTCCAAAATCACAGCTTCTGGACTTCTAGAACAGCTAAGTGCTACTAGAGACACTAGTGACTATCTATGGTACATAACCAGTGTTGACATTAGTCCATCGGAATCATTTCTTCGAGGAAGGAACAAGCCTAGTATTAGTGTGCACTCCTCTGGTGATGCCGTCCATGTGTTTATCAATGGGAAATTTTCAGGCATGTATTTCACATTTAACGGGCCTATTGACCTACGAGCTGGGACTAATAAAATAGCACTTCTAAGTGTAGCTGTTGGATTACCTAACGGCGGAATCCATTTTGAGTCATGGAAGACAGGAATCACAGGTCCAGTTTTGCTCCATGGTCTTGATCGTGGACAGAAAGATTTGACAGGGCAGAAATGGTCATACCAGGTTGGCCTAAAAGGAGAAGCTATGAATTTGGTGTCTCCCAATGGTGTGTCATCTGTTGATTGGGTGCGAACGTCGCTAGCTTCTCAAAATCAGCCACAGTTGAAATGGCACAAGGCTTATTTCAATGCACCTAATGGAGTTGAACCATTGGCATTGGACATGAGCAGTATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTAACTGTAATGGTTGTAACTATGCCGGAACATATCGTCAGGCGAAGTGTCAAATTGGTTGCGGACAACCTACCCAACGATGGTACCATGTTCCAAGGTCCTGGTTAAAGCCAACAAATAACTTGCTGGTGGTTTTCGAGGAATTAGGAGGGAATCCATGGAAAATATCTCTGGTAAAGAGGATAGTGCATACTCCAAGAGTTAGTGAATCAAATTTAATGACTAATACAACACAAGTATGA 2211 0.4062 METNSVSKLLLLFFTVFFLSSEFTQCSVTYDRKALLINGQRRILISGSIHYPRSTPEMWEDLIQKAKDGGLDVIDTYVFWNVHEPSPSNYNFEGRYDLVHFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMEGFTRKIVEMMKNEKLFQSQGGPIILSQIENEYGPQGRALGASGHAYSNWAAKMAVGLGTGVPWVMCKEDDAPDPVLNACNGFYCDDFIPNKPYKPKLWTESWSGWFSEFGGPLPQRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDAKVTSLGAYEQAYVFSSGTTCAAFLANYHSNSAARVTFNNRHYDLPAWSISILPDCRTDVFNTARVRFQPSQIQMLPSTSKLFSWETYDEDVSSLAENSKITASGLLEQLSATRDTSDYLWYITSVDISPSESFLRGRNKPSISVHSSGDAVHVFINGKFSGMYFTFNGPIDLRAGTNKIALLSVAVGLPNGGIHFESWKTGITGPVLLHGLDRGQKDLTGQKWSYQVGLKGEAMNLVSPNGVSSVDWVRTSLASQNQPQLKWHKAYFNAPNGVEPLALDMSSMGKGQVWINGQSIGRYWMVYAKGNCNGCNYAGTYRQAKCQIGCGQPTQRWYHVPRSWLKPTNNLLVVFEELGGNPWKISLVKRIVHTPRVSESNLMTNTTQV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00261 736 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Tsu01g00261 736 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Tsu01g00261 736 PANTHER BETA-GALACTOSIDASE RELATED 3 724 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Tsu01g00261 736 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Tsu01g00261 736 Gene3D - 592 723 - -
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 610 624 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 637 653 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Tsu01g00261 736 Gene3D Glycosidases 21 343 - -
Tsu01g00261 736 PANTHER BETA-GALACTOSIDASE 3 724 - -
Tsu01g00261 736 SUPERFAMILY Galactose-binding domain-like 574 723 IPR008979 -
Tsu01g00261 736 SUPERFAMILY Galactose-binding domain-like 401 564 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00261 Tsu-Chr1 2154403 2158894 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00261 01 2154403 2158894 Tsu04g03470 04 43843037 43849073 ECH
Tsu01g00261 01 2154403 2158894 Tsu01g00261 01 2154403 2158894 ECH
Tsu01g00261 01 2154403 2158894 Tsu07g00304 07 2341878 2346620 PCT