Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00247 ATGAACACAATTCGATCTCGTTGGTTAGCAAAAATGGCGGCAGAAAACACTGGAAAAAACAGCCTCGAATCTCGCGGTTTCTGGCCATTCCTCCGCCGTTGGATCCCTACTTCTACCGACCACATCATCAATGCCGAGAAACGCCTTCTTTCTCTTGTCAAGACTCCGTATGTTCAAGAACAGGTGAATATTGGCTCTGGTCCACCTGATTCAAGAGTGAGATGGTTTCGTTCATCTAGCAATGAACCGCGGTTTATTAACACGGTTACTTTTGACAGTAAAGACGATTCTCCCACGCTTGTAATGGTTCATGGATATGCTGCATCACAGGGTTTCTTTTTTCGCAATTTTGATGCCCTTGCCTCGCGTTTTAGAGTCGTTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCAGATTTTACATGCAAAAGCACCGAAGAAACCGAGGATTGGTTCATTGATTCTTTTGAGGAATGGAGGAAAGCCAAAAACATAAGTAAATTTATACTTCTTGGGCATTCTTTTGGTGGTTATATTGCTTCCAAATATGCGCTTAAGCACCCAGAGCGCGTACAACACTTGGTTTTAGTGGGATCTGCTGGATTTTCATCAGAAACagagaggattacaaagttttTGTCAACATGGAAGGGATCAATCATGAACCAAATATGGGAATCCAATTTTACACCTCAGACAATTATCagAGGTTTAGGTCCTTGGGGTCCTGATCTAGTCGCCAGGTATACAAGTGCTAGGTTTATCAAATACTCAACTGGGGAACTGTTGACAGAATCTGAATCGAAATTACTAACAGATTATGTTTATCATACATTAGCAGCCAAAGCTAGCGGTGAGCTgtgcttaaaatatattttttcatttggaGCATTTGCCAAGTCGCCTCTTCTACACAGTGCCTCAGAGTGGAAAGTGCCCACCACTTTCATATATGGTTTCAATGACTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATCCGAGTTCCACAGTCCGGGCACTTTGTGTTCATTGAAAACCCATCTGCCTTCCATTCAGCGGTGTTTTACGCTTGTCGAAGGTTTCTTAGTCCTGATCCCGACAGTGAATCCCTTCCTGAAGGGCTAACATCTGCATAG 1173 0.422 MNTIRSRWLAKMAAENTGKNSLESRGFWPFLRRWIPTSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALASRFRVVAIDQLGWGGSSRPDFTCKSTEETEDWFIDSFEEWRKAKNISKFILLGHSFGGYIASKYALKHPERVQHLVLVGSAGFSSETERITKFLSTWKGSIMNQIWESNFTPQTIIRGLGPWGPDLVARYTSARFIKYSTGELLTESESKLLTDYVYHTLAAKASGELCLKYIFSFGAFAKSPLLHSASEWKVPTTFIYGFNDWMNYEGAQEARKHMKVPCEIIRVPQSGHFVFIENPSAFHSAVFYACRRFLSPDPDSESLPEGLTSA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00247 390 Pfam alpha/beta hydrolase fold 98 211 IPR000073 -
Tsu01g00247 390 PRINTS Alpha/beta hydrolase fold signature 123 138 IPR000073 -
Tsu01g00247 390 PRINTS Alpha/beta hydrolase fold signature 186 199 IPR000073 -
Tsu01g00247 390 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
Tsu01g00247 390 PANTHER BNAA01G13630D PROTEIN 27 377 - -
Tsu01g00247 390 SUPERFAMILY alpha/beta-Hydrolases 87 366 IPR029058 -
Tsu01g00247 390 Gene3D alpha/beta hydrolase 84 370 IPR029058 -
Tsu01g00247 390 PRINTS Epoxide hydrolase signature 347 369 IPR000639 GO:0003824
Tsu01g00247 390 PRINTS Epoxide hydrolase signature 123 138 IPR000639 GO:0003824
Tsu01g00247 390 PRINTS Epoxide hydrolase signature 172 185 IPR000639 GO:0003824
Tsu01g00247 390 PRINTS Epoxide hydrolase signature 314 330 IPR000639 GO:0003824
Tsu01g00247 390 PRINTS Epoxide hydrolase signature 186 199 IPR000639 GO:0003824
Tsu01g00247 390 PANTHER RE40534P-RELATED 27 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00247 Tsu-Chr1 2021198 2025174 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00247 01 2021198 2025174 Tsu01g00247 01 2021198 2025174 ECH
Tsu01g00247 01 2021198 2025174 Tsu07g00286 07 2177148 2179639 PCT