Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00245 ATGGAAGATTCGAGGTTAgggacgaagaagaagaagagatctaAACCGGTTGAAATTGGTTTTGATTCTGATAACGATGAGCCAATTGGTTCTTTGTTTAAGTttaagaagaataagaaggaTGTTGAAAATTCTAGGGTTCTTGCTGATAATGATACTTTGGCTAGTTTTAGGAAGAGGTTGAAGGGTCCAAAGAGAGATCATGGATCTGAAACTGTGTCTGCTGTTGAGGGttgtgatgatgatggtttgatTGAAGGAGGATCTGGGAGGAGCGCGGCAAAGGATGAGGAAGGAGGTGATGATGACATGCAGGTGCATCATTCTTCTGATCAGCGTATGGAAGAATCATTGTCTGCGATTTTTAATAAGTCGCAATCTAGTTCTGTTAAGAAATCTAGGGCTGGGTTAGGTTCAAAGAAGAAAAGAGGGCATCAGAATGTGGATAGTGGGTTGGAACATGGATGCAAAAGTTTGACAGAAAATGTTGATTGTGTGGTTGAAAGTAGATCTGGATCTGCTTCTGCGTTGAAATCGGTTGAGAGGAATCATGAGTCTGATATGTTTTGTTCAGTATCTGCAATGGATGATCAAAACGGTGGTGATGACTGTTTTCAAGAGGAAAAAGCGAAGGGTGTTTGTGATTCAAACAATCCAGATGGGTTGTCGGTTGATCACTCTAAACGAATCATTGACTGTGATGGAAATAGGCAGCAATTGTCAAGTGTACATGTTGGAGATGTTTGTGGTGCTTCTGATGAAAAGGTTGCATTGCATGAAAGATTTCTCGATAATAGTTTGAATCAGTGTTCTTCCAAGTTACAAGATGTTGAAATAATTGATACTGCCTCTCCCTCTAAACTGGGGGAAGGGGTATGTGGATTTTCCGAGACTAAAGAGCTTAAGAATAGATTAACTGATGAAATAGCAGAAGAACAAGTGTGTAATGGTGCTTCAGAAGGTGTTTCCACTTCCTATCACACCGGGCTCTTGatcaaatcaaatgaaaatatattgaaTGAGAATGTGAATAATGACATGGTTTCTGAAAATATTTTCCAGGAATCTTCAATCAATGGAGGTATAAAATTGGAAGCTGAGTTTGTTTCTGGTCGAAATTGTTATGATTACAGTACATCAGATACAAATGCTGAAGTTCAAGATGTTGTCGTATGCTGTTCACCTGAAAAACATGATGTGATTGCCAGTGGTAGTTTATCCTCTGTTGTCCCTAACGGCGCCGATGAACCTGAATTGATTGTCCAGTCGAATCACCCAGACAAACCTTTGGAAATGTGTAATATTCCAAAAGACTCCACTGTTTCAATTCTGAAATGCAGCTCTGTGTTAGATCCAACTCAATCTGATGGATCCTCTATACAATCTTCAATTCCAGATGAAAATGGAAACGTTGCAGAATATCATACCTCTGTGTCTGATTTTGCTGACAATGGTGGTAAGATATCAGGCATTCCTCGTGCAGCACGAAAGACCAAAATGAATAAGCATGGCGACATGACTTATGAGGGGGATGCTGATTGGGAGATTTTAATAAATGACAAATCCCTAAGAACAAGAGGGAAGCAGGACTCCTCTTTGAATGCTGTTGAGGACTCTGAAAATGTTGCAGTAGCAGCAGTATCTGCTGGGCTGAAAGCTTGTGCAGTTGGTccaattgagaaaataaaatttaaggaGATCTTGAAGCGAAAAGGTGGTCTCAAGGAATATTTAGATTGCAGGAATCAGATCTTAAGCCTATGGAGCAGTGATGTTGCACGTATTTTGCCTCTTGCTGAATGTGGAGTTAGCGATATCCGTTCCGAGAATGAAAGTCCTCGTACTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATATGGTTATATAAATGTTGGAGTTGCCTCTCAAAAGGAGAATGTTGAGAGCAGCGCAAGACATTGTTATAAACTTGTAAAAGAAAAAGGATTCGAGGAAAGTTCTACAGCTTCATTGGCCGGCTCTGAAGATGGCGTTTCTTTTATTGTTGGTCAGGCTAAAATGTCATATGCTTCTATGGATGTTAACGATGGTCTAATAAAGGATTTTGAAGACATGACAACTGAAGCTACAGATGGCATGATGCATGTTAATGAAGCGATGATGGATTCATCAAACATGGCACAAcctgaaagaaaaaattatgatGACGGGGAAAATGTTGGGATTCAGGATGGCGACAGTGGAATTGTACATTTCAGTAACAGTTCTGTTCCTTTGTTTAAGCTTCCCGATTGTGGATTGACTTCTCTTGTTACTATGAAGCAAAACAATGAATCTAAATGTGTTAAACATGCGTTAGGTGATACTCTGCACTCTGATTTAGAGACTAGAAAGAGAGTGATTATCATCGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTGAATCGTCAGGGTTTTGCCGTAACTGTGCTTGAGGCTAGGAATAGGATAGGAGGTCGGGTATTTACAGATCACAAATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGCATTATCACAGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCTGATCCTTCCTCAGTGGTTTGCGCTCAGTTGGGCCTTCAATTGTCGGTGTTAAACAGTGACTGCCCTCTTTATGACATAGTGACTGGACAAAAAGTTCCTGCAGATATGGATGAAGCATTGGAAGCTGAATACAACAGTCTTCTTGATGACATGGTACTGGTTGTTGCTCGGAAAGGTGAACAAGCAATGAAAATGTCTCTTGAAGACGGTTTAGAATATGCCCTTAAGATTCGCCGCATGGGACATTCTAAAGGCAGTGAAGAAACTAAGCAAAGTAATTCTGCAGATCGTGCTATGGAACAAAATTTTGATGAGATTTTGGATCCTCGGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTAGAGTATGGCTGTGCTGCTTTGCTTAAAGAAGTTTCTCTTCCTTATTGGAATCAAGACGATGTGTATGGAGGATTTGGGGGACCTCATTGTATGATCAAAGGAGGTTATAGCACTGTTGTTGAGTCTCTTGGGGAAGGGCTTGCTATTCACTTGGACCACGTCGTAACAAATGTGTCATATGGTATCAAGGAACCTAGCGAGAATAATAAAGTCAAAGTTTCTACATTGAATGGCAATGAGTTTTTTGGAGATGCTGTCCTCATTACTGTCCCACTTGGCTGTTTGAAGGCCAAAACTATACAGTTCTCCCCCTCTTTGCCCGAGTGGAAATGTTCTTCCATTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTACTGTGTTTTGGGATGATGCGGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAAGAAAACAGTAGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGTTTAAGCTCTTCTGATCATGTGAACCACGCATTGAAGGTTCTTCGAAAACTTTTTGGGGAGGCTTCAGTTCCTGACCCTCTTGCGTATGTTGTGACCGATTGGGGCAGGGATCCCTATAGCTTTGGTGCTTACTCTTATGTTGCTGTTGGAGCATCAGGAGAAGACTATGATATCTTAGGAAGACCAGTTGATAACTGCTTGTTTTTTGCTGGCGAAGCAACCTGCAAAGAGCACCCTGATACTGTTGGTGGTGCAATGATGAGCGGACTACGGGAGGCTGTTCGCATAATTGACATATTGAACACTGGAAATGATAATACTGCAGAGGTAGAGGCATTGGAAGCTGCACAGGGACAATTGGACACCGAAAGGAATGAAGTTAGGGACATAATAAAGAGACTTGATGCAGTTGAGCTTTCTAATATATTGTATAAGAACTCTTTTGAGGGTGCTCCAATCTTAACCCGGGAAGCTTTATTAAGGGAAATGTTCCTCAACGTGAAAACCAATGCTGGGCGTTTGCATGTGGCCAAACAATTGCTAAGTCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGAAGTAAGGAGGGACTAACTGTTCTCAACTCCTGGATACTGGACTCAATGGGCAAGGATGGAACCCAACTTTTGAGGCACTGTTTGCGTCTTCTTGTGCGTGTGTCGACTGATCTAGGTGCTGTACGCTTATCAGGAATGGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGAGCTATAGCTAGTCAATTGGTCAATGTATGGCTTGAACTTTTCCGCAAGGAAAAAGCTTCAAATGGGGGATTGAAGTTGTCAAGACAAGCAACTACTGTAGaattgtcaaaaagaaaatctttAAAGGATTCAGCCTCGGGAAAGCCTCCTCTAAGCATACATCAGGGTGCCGTTGAGAATAAAGGAGGCTTGCTGAATCCTCTATCTGCTGGAAGCAATTCACCTTCCAACACACATGCGAAGAAGTTGCACAGCAAACAAGGAAGACAACAATCAGCATGTGACTCGAGGCATGATGTCTGTTCTTCTAGGTCCCAAGGTTCAATAGACAAAATACCTACTAAGGAGGAAAATAATCACTATGCTAtgtctgaagaagaaaaggctGCTTTAGCTGCTGCAGAAGCTGCCCGTACTAAAGCAATTGCTGCTGCCAAGGCATATGCCTCTGCAGAAGCTAGGTGCAGTACACTGTTGCAGCTTCCGAAGATACCCTCATTCCATAAATTTGCTAGGCGGGAACAGTATTCACAAAATGATGAGTGTGATAGTAGAAAAAAGTTGTCTGGTGGTTTTTTTGGAAGGCAAGATTGTGTTTCTGAGATCGATTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTTTCCACTGCTTGTGTTAACCTTGATAATTCTAAAATACCAGTTGACAACCTCTCACAGAGGAGTCATTCAAATGAGATCGCCAGCCATTTGAATTTTGGAGAGCGCTCAGGAGAAAGTGCTGCCGTGGACAGCAATCTATATACAAAAGCTTGGATCGACACAGCTGGTGATGGGGTAGTAAAAGACCATCTTGCCATAGAGAGATGGCAAGATCAAGCAGCTGAAGCTGATTCTTATTTTTCTAATCAAAGCATTCATTTGAAGGATGAGGAGGATTCAAATGCCTATTCAAGGTTACCCAGTTGGAAACATGATGGTGTAGCAAATGAAAGTTCTGTTTCCCAGGTTACTGTAAATAAGGAGGAGGCCAGCAAAGGTCATTCTCGAGGAGCAGATCATATTAAACAGGCTGTTGTTGACTATGTTGGATCACTACTTTTGCCCCTTTATAAGGCTAGGAAGCTAGACAAGGATGGATACAAGGCAATAATGAAGAAAAGTGCAACTAAGGTCATGGAGCAAGCAACGGATGCAGAAAAAGCCATGGCTGTTCGTGAGTTTCTAGATTTTAAGCGAAGGAATAAGATTCGCTCCTTTGTGGATATATTGATTGAGAGACATATGAAAACAAAACCGGGTACAAAATCATAA 5568 0.4091 MEDSRLGTKKKKRSKPVEIGFDSDNDEPIGSLFKFKKNKKDVENSRVLADNDTLASFRKRLKGPKRDHGSETVSAVEGCDDDGLIEGGSGRSAAKDEEGGDDDMQVHHSSDQRMEESLSAIFNKSQSSSVKKSRAGLGSKKKRGHQNVDSGLEHGCKSLTENVDCVVESRSGSASALKSVERNHESDMFCSVSAMDDQNGGDDCFQEEKAKGVCDSNNPDGLSVDHSKRIIDCDGNRQQLSSVHVGDVCGASDEKVALHERFLDNSLNQCSSKLQDVEIIDTASPSKLGEGVCGFSETKELKNRLTDEIAEEQVCNGASEGVSTSYHTGLLIKSNENILNENVNNDMVSENIFQESSINGGIKLEAEFVSGRNCYDYSTSDTNAEVQDVVVCCSPEKHDVIASGSLSSVVPNGADEPELIVQSNHPDKPLEMCNIPKDSTVSILKCSSVLDPTQSDGSSIQSSIPDENGNVAEYHTSVSDFADNGGKISGIPRAARKTKMNKHGDMTYEGDADWEILINDKSLRTRGKQDSSLNAVEDSENVAVAAVSAGLKACAVGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWSSDVARILPLAECGVSDIRSENESPRTSLIREVYAFLDQYGYINVGVASQKENVESSARHCYKLVKEKGFEESSTASLAGSEDGVSFIVGQAKMSYASMDVNDGLIKDFEDMTTEATDGMMHVNEAMMDSSNMAQPERKNYDDGENVGIQDGDSGIVHFSNSSVPLFKLPDCGLTSLVTMKQNNESKCVKHALGDTLHSDLETRKRVIIIGAGPAGLTAARHLNRQGFAVTVLEARNRIGGRVFTDHKSLSVPVDLGASIITGVEADVATERRPDPSSVVCAQLGLQLSVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLLDDMVLVVARKGEQAMKMSLEDGLEYALKIRRMGHSKGSEETKQSNSADRAMEQNFDEILDPRERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGPHCMIKGGYSTVVESLGEGLAIHLDHVVTNVSYGIKEPSENNKVKVSTLNGNEFFGDAVLITVPLGCLKAKTIQFSPSLPEWKCSSIQRLGFGVLNKVILEFPTVFWDDAVDYFGATAEERSKRGHCFMFWNVKKTVGAPVLIALVVGKAAIDGQSLSSSDHVNHALKVLRKLFGEASVPDPLAYVVTDWGRDPYSFGAYSYVAVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDNTAEVEALEAAQGQLDTERNEVRDIIKRLDAVELSNILYKNSFEGAPILTREALLREMFLNVKTNAGRLHVAKQLLSLPVGNLKSFAGSKEGLTVLNSWILDSMGKDGTQLLRHCLRLLVRVSTDLGAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLELFRKEKASNGGLKLSRQATTVELSKRKSLKDSASGKPPLSIHQGAVENKGGLLNPLSAGSNSPSNTHAKKLHSKQGRQQSACDSRHDVCSSRSQGSIDKIPTKEENNHYAMSEEEKAALAAAEAARTKAIAAAKAYASAEARCSTLLQLPKIPSFHKFARREQYSQNDECDSRKKLSGGFFGRQDCVSEIDSRNCRVRDWSVDFSTACVNLDNSKIPVDNLSQRSHSNEIASHLNFGERSGESAAVDSNLYTKAWIDTAGDGVVKDHLAIERWQDQAAEADSYFSNQSIHLKDEEDSNAYSRLPSWKHDGVANESSVSQVTVNKEEASKGHSRGADHIKQAVVDYVGSLLLPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMAVREFLDFKRRNKIRSFVDILIERHMKTKPGTKS 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00245 1855 SUPERFAMILY FAD-linked reductases, C-terminal domain 1102 1213 - -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 91 114 - -
Tsu01g00245 1855 Coils Coil 1280 1300 - -
Tsu01g00245 1855 PRINTS Adrenodoxin reductase family signature 794 816 - -
Tsu01g00245 1855 PRINTS Adrenodoxin reductase family signature 817 830 - -
Tsu01g00245 1855 Gene3D - 901 1219 - -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 60 75 - -
Tsu01g00245 1855 Gene3D - 795 1262 IPR036188 -
Tsu01g00245 1855 Pfam SWIRM domain 555 632 IPR007526 GO:0005515
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 1 27 - -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g00245 1855 Pfam Flavin containing amine oxidoreductase 803 1264 IPR002937 GO:0016491
Tsu01g00245 1855 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 499 1851 - -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 60 153 - -
Tsu01g00245 1855 Gene3D - 541 647 IPR036388 -
Tsu01g00245 1855 ProSiteProfiles SWIRM domain profile. 542 642 IPR007526 GO:0005515
Tsu01g00245 1855 SUPERFAMILY FAD/NAD(P)-binding domain 791 1267 IPR036188 -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 115 134 - -
Tsu01g00245 1855 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1362 1446 IPR035441 -
Tsu01g00245 1855 PANTHER FLAVIN MONOAMINE OXIDASE 499 1851 - -
Tsu01g00245 1855 SUPERFAMILY Homeodomain-like 540 637 IPR009057 -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 1458 1538 - -
Tsu01g00245 1855 MobiDBLite consensus disorder prediction 1489 1532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00245 Tsu-Chr1 1994866 2005696 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Tsu01g00245 Amino_oxidase 1.5e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00245 01 1994866 2005696 Tsu01g00245 01 1994866 2005696 ECH