Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00244 ATGACCACCACCTACCTCTTCTTCCTTCTTACAATTCTCATAACCACCACCATCACATCTCCGGTAGCTGCCGCCGGTAACGGACGATGGCAGGTACTCCAAAAAAACATCGGCATTGTAGCCATGCACATGCAACTTCTTCACAATGACCGCATTGCCATATTCGACCGTACTGACTTCGGCTTATCAAATCTTTCTTTACCCGACGGAAAGTGTCGTAACGACCCGAGAGAAACCACGGTTAAAATTGATTGTACGGCTCATTCGATCGAATACGACGTAAAATCTAACACTTTCCGTCCATTGTTTGTACAAACCGATGTTTGGTGTTCTTCTGGATCAGTGAATCCTGCCGGAACACTCATCCAAACCGGTGGCTACAACGATGGAGACCGCGCCGTTCGAACCTTTGAACCTTGTAATGATTGTGATTGGCGGGAAATTGACGGCGGACTTGCTGCTCGGAGATGGTATGCTACTAATCATATTCTACCGGACGGCCGTCAAATTGTCATTGGCGGTAGAAAACAATTCAACTATGAGTTTTACCCCAAAAATGGTGGTGGAAATGTATATAATTTACCATTTTTGGCTCAGACTAATGATCGTGGTGCAGAGAATAATTTGTACCCATTTGTTTTTCTCAATGTGGATGGCAACCTCTTCATCTTTGCTAACAATAGAGCTATCCTCTTCGATTATACTAAGAATGCTGTGGTGAGAACATTTCCACAAGTGCCAGGTGGGGAACCTAGAAGTTATCCAAGCACAGGTTCAGCGGTATTGTTGCCATTAAAAAATCTACAAGCAAAGTTGGTAGAAGCTGAGGTTTTGATTTGTGGTGGAGCTTCAAAAGGAGCTTATCAAAGTGCAGGAAGGAAAGAGTTTCTAGGAGCTTTGGATACTTGTGCCCGAATAAAAATAACCGATCCGAATCCAAGATGGGTTGTGGAGACAATGCCCGCAGCTAGAGTCATGGGTGATATGGTAATGCTTCCGAATggtgacattttaattattaatggAGCATCTTCGGGCACAGCCGGATGGGAATACGGGCGTAACCCAGTTTTGACTCCGGTTATTTACAAAACGAATAATCCAGCTGGATCACGGTTTGAATCACAAAACCCGTCTGATACACCTCGAATGTATCATTCTAGTGCTATTTTGGTTCGTGATGGGAGGGTTCTTGTTGGTGGTAGTAACCCTCATGTTGGTTACAATTTTGCGAATGTGTTATTTCCGACTGAACTTAGTCTTGAAGCTTTTTCTCCTTCTTACCTTGAACCAATCTTCGCAAATGTTCGTCCGAGGATTGTGTCTCGTATTGCAGCACAAAAGCACGGTCAAAGGTTGGTGGTTCGATTTGAGGTGCAAGCAGCATTGGATCGTAATTCAGTACACGTTACAGTGTTGGCGCCGCCGTTTAATACACACTCATTCTCCATGAATCAgagattgttggtgttggaGCCAGGTAAAGTGACTAATGTGGCAAGAACAGCGTATGAAATTGATGTTACAATGCCTGGTTCACCTATTCTTGCACCTCCTGGTTTTTATATGCTATTTGTGGTTCATAAAGAAATTCCAAGTGAAGGTGTTTGGATACAACTTCATTGA 1626 0.4274 MTTTYLFFLLTILITTTITSPVAAAGNGRWQVLQKNIGIVAMHMQLLHNDRIAIFDRTDFGLSNLSLPDGKCRNDPRETTVKIDCTAHSIEYDVKSNTFRPLFVQTDVWCSSGSVNPAGTLIQTGGYNDGDRAVRTFEPCNDCDWREIDGGLAARRWYATNHILPDGRQIVIGGRKQFNYEFYPKNGGGNVYNLPFLAQTNDRGAENNLYPFVFLNVDGNLFIFANNRAILFDYTKNAVVRTFPQVPGGEPRSYPSTGSAVLLPLKNLQAKLVEAEVLICGGASKGAYQSAGRKEFLGALDTCARIKITDPNPRWVVETMPAARVMGDMVMLPNGDILIINGASSGTAGWEYGRNPVLTPVIYKTNNPAGSRFESQNPSDTPRMYHSSAILVRDGRVLVGGSNPHVGYNFANVLFPTELSLEAFSPSYLEPIFANVRPRIVSRIAAQKHGQRLVVRFEVQAALDRNSVHVTVLAPPFNTHSFSMNQRLLVLEPGKVTNVARTAYEIDVTMPGSPILAPPGFYMLFVVHKEIPSEGVWIQLH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00244 541 CDD E_set_GO_C 432 540 IPR015202 -
Tsu01g00244 541 Gene3D Immunoglobulins 436 541 IPR013783 -
Tsu01g00244 541 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 20 540 - -
Tsu01g00244 541 Gene3D - 24 431 IPR037293 -
Tsu01g00244 541 SUPERFAMILY E set domains 433 540 IPR014756 -
Tsu01g00244 541 PANTHER SECRETED PROTEIN-RELATED 20 540 - -
Tsu01g00244 541 Pfam Glyoxal oxidase N-terminus 42 282 IPR009880 -
Tsu01g00244 541 Pfam Galactose oxidase-like, Early set domain 437 539 IPR015202 -
Tsu01g00244 541 SUPERFAMILY Galactose oxidase, central domain 89 430 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00244 Tsu-Chr1 1983119 1986257 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00244 01 1983119 1986257 Tsu01g00244 01 1983119 1986257 ECH
Tsu01g00244 01 1983119 1986257 Tsu07g00283 07 2151242 2153596 PCT