Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00240 ATGGAAGGTTTTGATCAAagtggtaataataataaaaatattcatacatCATTTAGTTCATCTTTAGGTGCATCTGCCAAACCCCCAATTAGGTTGAATTCTATGCCTATTAATCAAATTAATCAAATGGGTTTTCTTGAAAATCAAAAAAGTTCTGGTCTTGGTATACCACCTTCATACCCTAATACTAGTTTATCACCTAAACCTTCATCTCCTTATCCTCAATTTATAGGTTCACAATCCCAAAGTCATTCTAGGTCTTTGTCTCAGCCTACTTTTTTCAATCTTGATTCATTTTCTTTGCCTCCATTGAGTCCTTCAGTTTATCCTCCTGTAAGTTCCAATCCTTTTTCTGATTCGGGTTCGAAAGATATTTCTATGGAGGAAAATTTTGGTGTTTCTCATGCACCTTCGCCTAACCGTGGTCATGCTGTTCAACATGGTCTTTGTCTTCCTCCTCGTAAAGGGCATAGGCGCTCTAGCAGTGATTCGCCTTTAGGGATATCAGAATTCGTTAACTCTGTCCCTCAGTTGGTGGGTGATCGTCGGAATTTGGTTTCTGGAGGAGAGAAATCGGGTTATGAGAAGCCGGTTCAGTTGGTGTTGAAGGATAGTAGGGACGGTGTTGATGGGTTTAGGGGAGAGGTTTTTGATGGGAAGAAACAGGATGATGCTATTGTAATGGATGATTTGTTTACTGCTTACATGAATTTGGAGAATATGAATAATATGAGTTTTTCCGGTATGGAAGATAGCAGAACTAGTGGTTCGAAGACTGTTGAAAGCAGTGATAATGAAGCTGAGAGTCATGTGAATGTAAAAGGAATAGGTGCTAAGGGTGCAAGTTCAAGCGGTTCGGAAGAGAGGAGGGAAGGAATCAAGAGAAGTTCTAATGGAGATATTGCACCGGGTAGTCGGCATAGGAGAAGTTTCTCATTGGACAGTTCCATTGGAAATTTCCATTTTGATGATGGATCGCCTAAGCTTCCTCCTTTACAAAGTCGAGCTGGTCAACACTCGCCAAGCAATTCAATGGATGGTTGTAAAACACCAGAAATCAGCATGGAGTTTGGAAATGGTGAATTCAGCTCACAGGAGATCAAGAAAATAATGGAAAATGATAAGCTTGCTGAAATTGCCGCGTCTGATCCCAAGCGCGCAAAGAGGATTTTGGCCAATCGTCTATCAGCTGCTCGCTCAAAGGAGCGGAAGATGCGATACATTTCTGAATTGGAGCACAAGGTCCAAACTCTTCAGACAGAGACTACTACATTGTCTACTCAGTTTACCAAATTACAGGTGCTTATCAACTGA 1314 0.4049 MEGFDQSGNNNKNIHTSFSSSLGASAKPPIRLNSMPINQINQMGFLENQKSSGLGIPPSYPNTSLSPKPSSPYPQFIGSQSQSHSRSLSQPTFFNLDSFSLPPLSPSVYPPVSSNPFSDSGSKDISMEENFGVSHAPSPNRGHAVQHGLCLPPRKGHRRSSSDSPLGISEFVNSVPQLVGDRRNLVSGGEKSGYEKPVQLVLKDSRDGVDGFRGEVFDGKKQDDAIVMDDLFTAYMNLENMNNMSFSGMEDSRTSGSKTVESSDNEAESHVNVKGIGAKGASSSGSEERREGIKRSSNGDIAPGSRHRRSFSLDSSIGNFHFDDGSPKLPPLQSRAGQHSPSNSMDGCKTPEISMEFGNGEFSSQEIKKIMENDKLAEIAASDPKRAKRILANRLSAARSKERKMRYISELEHKVQTLQTETTTLSTQFTKLQVLIN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00240 437 CDD bZIP_plant_RF2 386 415 IPR044759 GO:0003700|GO:0006355
Tsu01g00240 437 PANTHER BZIP TRANSCRIPTION FACTOR 68 434 - -
Tsu01g00240 437 SUPERFAMILY Leucine zipper domain 385 433 IPR046347 GO:0003700|GO:0006355
Tsu01g00240 437 MobiDBLite consensus disorder prediction 1 89 - -
Tsu01g00240 437 MobiDBLite consensus disorder prediction 246 262 - -
Tsu01g00240 437 MobiDBLite consensus disorder prediction 130 168 - -
Tsu01g00240 437 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 383 437 IPR004827 GO:0003700|GO:0006355
Tsu01g00240 437 Coils Coil 401 421 - -
Tsu01g00240 437 Pfam bZIP transcription factor 385 433 IPR004827 GO:0003700|GO:0006355
Tsu01g00240 437 MobiDBLite consensus disorder prediction 69 89 - -
Tsu01g00240 437 MobiDBLite consensus disorder prediction 246 347 - -
Tsu01g00240 437 MobiDBLite consensus disorder prediction 333 347 - -
Tsu01g00240 437 SMART brlzneu 381 435 IPR004827 GO:0003700|GO:0006355
Tsu01g00240 437 Gene3D - 384 437 - -
Tsu01g00240 437 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 68 434 - -
Tsu01g00240 437 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00240 Tsu-Chr1 1933486 1937609 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu01g00240 bZIP_1 6.5e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00240 01 1933486 1937609 Tsu01g00240 01 1933486 1937609 ECH