Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00200 ATGAAAACAGTCCAAAATAGTAAGATCAAAGAAGTCAGAACGAAGAAGAACAAAACCATCCAAACAATGATCTCTGTTTCTTCTCCTCTTACTGTTACCTCTGTCGTGGGAGTGGGACCTTTTCTTTCACGATCCCGCCGGCGTTCAACCACGACCGTCCGATCCAGCACAGTGTCAGTTGGACCAACCAGATTATTAACCAAACTGAAACATGATTGTGACactcctcttcctcttcttcagcAAGTAGCTGATGCCATGTCATCTCAAATGCGGGCTGGGCTTTCCTCTGATAATGGGCCCGGGCTTCCCATGATACCCACTTTTGTCCACACTCTTCCCACCGGGAATGAGAAAGGATTGTTTTATGCATTGGATCTCGGTGGAACAAATTTTCGTGTGTTAAGGGTACAATTAGGTGGCAAAGATGATCGTGTCATTTCCACTGAATTTGATCAAGTTTCTATACCTCATGATCTCATGTTTGCTACATCccagGAGCTGTTTGACTTCATTGCTTTGGGGCTAGCCAAATTTGTGGCTAAAGAGGATGATAGATTTCATTTTCCACAACgaagaagaaagagagagattggTTTCACATTTTCATTTCCTGTCAAACAAACTTCTATCGACTCCGGCTTACTAATCAAGTGGACCAAGGGTTTTGCTGTCTCTGGAACTGTAGGAAGAGATGTGGTTGCTTGTTTGAACGAGGCAATGGAAAGACAAGGACTAGATATGCGAGTTTCTGCTCTGGTCAATGATACTGTTGGAACACTAGCCGGAGCAGAATATTGGGACAATGATGTTAAGGTTGCTGTTATTTTAGGTACCGGAACCAATGCTTGCTATATTGAGCAGATAAGTTCCATTCCAAAATTACAAGGCCATGTCTCTTCTTCTGGTAAAATGATCATTAGTACTGAATGGGGTGCTTTCTCAAATGGTCTACCTTTAACTGTATTTGATAGAGAAATGGATGCTGCTAGTATTAATCCTGGTCACCAGATCTTTGAGAAGACAATCTCAGGAATGTATCTAGGTGAAATTGTGAGACGAGTTCTATTCAATATGGCTGAAGAGGAAGGTTTGTTTGGAATATCTGTCCCTCAAAAACTGTCTACGCCGTTCATACTCGGgACCCCAGATCTATGCGCCATGCAGCAGGATAATTCTGGCGATTTACATGCAGTTGGATCCCTCCTCTATGATAAAGCCGGGGTTGAATCCAATCTAGGCGAAAGAAAAACAGTTCTAGAGGTTTGTGAGATAATTGTAAAGCGAGGCGGTAACTTAGCTGGTGCAGGAATAGTAGGAATTCTGCAAAAAATGGAAGAGGATTCAAAAGGTCTTATCTTTGGAAAGAGAAGTGTTGTTGCCATTGATGGGGGTTTGTATGAAAATTATCCTCAATACAGGACTTACTTGCAAGACTCAGTAAAGGAAATATTAGGGACAGAAAAGTCAAACAATGTTGTGATAGAACATTCAAAAGATGGTTCTGGTATTGGAGGTGCTCTATTGGCAGCTTCAAATTCCATATACAACCAAGATTGA 1560 0.4038 MKTVQNSKIKEVRTKKNKTIQTMISVSSPLTVTSVVGVGPFLSRSRRRSTTTVRSSTVSVGPTRLLTKLKHDCDTPLPLLQQVADAMSSQMRAGLSSDNGPGLPMIPTFVHTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDDRVISTEFDQVSIPHDLMFATSQELFDFIALGLAKFVAKEDDRFHFPQRRRKREIGFTFSFPVKQTSIDSGLLIKWTKGFAVSGTVGRDVVACLNEAMERQGLDMRVSALVNDTVGTLAGAEYWDNDVKVAVILGTGTNACYIEQISSIPKLQGHVSSSGKMIISTEWGAFSNGLPLTVFDREMDAASINPGHQIFEKTISGMYLGEIVRRVLFNMAEEEGLFGISVPQKLSTPFILGTPDLCAMQQDNSGDLHAVGSLLYDKAGVESNLGERKTVLEVCEIIVKRGGNLAGAGIVGILQKMEEDSKGLIFGKRSVVAIDGGLYENYPQYRTYLQDSVKEILGTEKSNNVVIEHSKDGSGIGGALLAASNSIYNQD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00200 519 Pfam Hexokinase 272 511 IPR022673 GO:0005524|GO:0005975|GO:0016773
Tsu01g00200 519 CDD NBD_sugar-kinase_HSP70_actin 124 287 - -
Tsu01g00200 519 SUPERFAMILY Actin-like ATPase domain 62 268 IPR043129 -
Tsu01g00200 519 Gene3D - 108 510 - -
Tsu01g00200 519 SUPERFAMILY Actin-like ATPase domain 270 512 IPR043129 -
Tsu01g00200 519 PANTHER HEXOKINASE 46 516 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Tsu01g00200 519 PRINTS Hexokinase family signature 123 139 - -
Tsu01g00200 519 PRINTS Hexokinase family signature 273 287 - -
Tsu01g00200 519 PRINTS Hexokinase family signature 250 266 - -
Tsu01g00200 519 PRINTS Hexokinase family signature 496 512 - -
Tsu01g00200 519 PRINTS Hexokinase family signature 198 223 - -
Tsu01g00200 519 PRINTS Hexokinase family signature 337 359 - -
Tsu01g00200 519 PRINTS Hexokinase family signature 419 441 - -
Tsu01g00200 519 ProSiteProfiles Hexokinase domain profile. 60 511 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Tsu01g00200 519 Gene3D - 86 499 - -
Tsu01g00200 519 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 46 516 - -
Tsu01g00200 519 Pfam Hexokinase 67 266 IPR022672 GO:0005524|GO:0005975|GO:0016773
Tsu01g00200 519 ProSitePatterns Hexokinase domain signature. 198 223 IPR019807 GO:0004396|GO:0005524|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00200 Tsu-Chr1 1548272 1551511 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00200 01 1548272 1551511 Tsu01g00200 01 1548272 1551511 ECH