Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00179 ATGATGAATCTCACAAGTTTTCCAATGACTTGTTCATCCTTCCTTCGTTTTGTCATTGTATTACTTGCATTATGCTACAAAACAAACGGTGTAATAAAACTACCACCAAATGTTACAGTTCCAGCAGTGATAGCATTTGGAGATTCCATAGTTGATTCaggaaacaacaacaacctcaaaactttggtcaaatgcAATTTCCCTCCTTATGGAAAAGATTTTCAAGGTGGTGTTCCAAGTGGTCGATTTTGCAATGGAAAAATTCCTTCAGACATAATAGCTGAAGAATTGGGTATCAAGGAGTATATCCCTGCATATTTGGATCCAAATCTCAAATCAAGTGATCTTCTTACAGGCGTAGGCTTTGCCTCTGGAGCTTCAGGATATGATCCTTTGACACCACAAATTGCgTCGGTGATACCATTATCTGCTCAACTAGACATGTTCAAAGAATATATAGGAAAGCTGAAAGGTATTGTTGGAGAGGAAAGAACAAAGTTCATACTAAACAACAGTCTTTTTATTGTGGTGGGAGGCAGTGACGACATTGCCAACACATATTATGTTGTTCATGCAAGATTGAATTATGACATTCCTGCTTACACAGATCTTATGTCCAACTCAGCCATTAATTTTGTAAAGgaaATACATAAACTTGGAGCTCGTAGAATTGCTGTATTGAGTGCACCACCAATTGGATGTGTTCCATCACAGAGAACTCTTGCAGGAGGGATTGTAAGAGAATGTGCAGAAAAGTATAATGATGCTGCAAAGTTATTCAATTCCAAAATCTCAAAGGAGCTTGATTCCCTCAGTCACAACTCACCCAATAGCAGGATTGTTTACATTGATGTTTACAACCCTCTACTTGATATCATTGTCAACTACCAAAAATATGGGTACAAAGTTGTGGACAGAGGTTGTTGTGGCACAGGCAAATTAGAGGTTGCAGTGTTATGTAACCCTTTGGATACTACTTGTTCTGATGCCTCAGAATATGTCTTTTGGGATAGCTATCATCCTACTGAAGGAGTATACAGACAGCTCGTAGATATAGtccttaaaaattatttaaacaaattgatATGA 1089 0.359 MMNLTSFPMTCSSFLRFVIVLLALCYKTNGVIKLPPNVTVPAVIAFGDSIVDSGNNNNLKTLVKCNFPPYGKDFQGGVPSGRFCNGKIPSDIIAEELGIKEYIPAYLDPNLKSSDLLTGVGFASGASGYDPLTPQIASVIPLSAQLDMFKEYIGKLKGIVGEERTKFILNNSLFIVVGGSDDIANTYYVVHARLNYDIPAYTDLMSNSAINFVKEIHKLGARRIAVLSAPPIGCVPSQRTLAGGIVRECAEKYNDAAKLFNSKISKELDSLSHNSPNSRIVYIDVYNPLLDIIVNYQKYGYKVVDRGCCGTGKLEVAVLCNPLDTTCSDASEYVFWDSYHPTEGVYRQLVDIVLKNYLNKLI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00179 362 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Tsu01g00179 362 Gene3D SGNH hydrolase 34 358 IPR036514 -
Tsu01g00179 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 360 - -
Tsu01g00179 362 Pfam GDSL-like Lipase/Acylhydrolase 43 350 IPR001087 GO:0016788
Tsu01g00179 362 SUPERFAMILY SGNH hydrolase 171 355 - -
Tsu01g00179 362 PANTHER GDSL ESTERASE/LIPASE EXL3 9 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00179 Tsu-Chr1 1379282 1383285 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00179 01 1379282 1383285 Tsu01g00179 01 1379282 1383285 ECH
Tsu01g00179 01 1379282 1383285 Tsu07g00245 07 1890826 1894517 PCT