Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g00157 atgttacaGGATTTGAAGGCCCAACTTGATAGTGGTAAGAAGTTGCCTTTCCCCGATGGAATCCTTATCAATGGTCGTGGTTCTGGAGGATCATCTTTCAATGTGGAGCAAGGAAAGACTTACAGGCTTAGAATATCAAATGTGGGGTTGCAAAATTCACTCAACTTTCGCATACAAAACCACAAGTTAAAGCTGGTTGAAGTGGAAGGAACACACACCCTCCAAACTACTTACTCGTCCCTTGATGTTCACGTGGGTCAATCATACTCAGTTCTAGTAACAGCAGACCAACCTGGTCAAGACTATTACATTGTTGTTTCCTCTCGATTTACCACTCCAGTACTCACCACCACCGGAGTTCTTCGCTACAGCAACTCTGCCGGCCCAGTATCAGGCCCACCCCCTGGTGGACCCACAATCCAAATTGACTGGTCTTTGAACCAGGCCCGTTCCATCAGGACAAACCTGACAGCAAGTGGACCAAGGCCAAACCCACAAGGATCATACCATTATGGCATGATAAACACAACCAGGACAATCGTACTTTCAAGTTCAGCTGGTCAAGTCAGTGGGAAGCAAAGATATGCAATTAACAGTGTGTCTTATGTTTCCCCCGACACTCCTCTTAAGCTTGCTGACTTCTTCCAGATATCTGGTGTTTACCGTCCTGGAAGCATCTCTGATAGACCCACTGGTGGGGGTATATACACTGACACTTCTGTTCTTCAAACTGATTACAGAACATTTGTAGAGATTGTTTTCCAAAATGATGAAGACATCCTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGTATGGATGGAGGACAATGGACAAGTGATAGCAGGAACCAGTACAATCTTAGAGATGCAGTTTCGCGTAGCACCACTCAGGTATATCCCAAGTCATGGACTGCTATATATGTTGCGCTCGACAATGTGGGAATGTGGAACTTGAGGTCTGAATTTTGGGCACGGCAATACCTTGGACAACAGTTTTATATGCGCGTATATACAACATCAACCTCACTCAGAGATGAATACCCTATTCCTAAGAATGCACTACTTTGTGGTAGAGCAGCTGGAAGACATACTCGACCCCTTTAA 1116 0.4462 MLQDLKAQLDSGKKLPFPDGILINGRGSGGSSFNVEQGKTYRLRISNVGLQNSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPGQDYYIVVSSRFTTPVLTTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIVLSSSAGQVSGKQRYAINSVSYVSPDTPLKLADFFQISGVYRPGSISDRPTGGGIYTDTSVLQTDYRTFVEIVFQNDEDILQSYHLDGYSFFVVGMDGGQWTSDSRNQYNLRDAVSRSTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSLRDEYPIPKNALLCGRAAGRHTRPL 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g00157 371 Pfam Multicopper oxidase 5 125 IPR001117 -
Tsu01g00157 371 Pfam Multicopper oxidase 207 343 IPR011706 GO:0005507|GO:0016491
Tsu01g00157 371 Gene3D - 172 367 IPR008972 -
Tsu01g00157 371 CDD CuRO_3_AAO_like_1 205 325 IPR034275 GO:0005507
Tsu01g00157 371 SUPERFAMILY Cupredoxins 173 362 IPR008972 -
Tsu01g00157 371 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 4 364 - -
Tsu01g00157 371 Gene3D - 1 162 IPR008972 -
Tsu01g00157 371 PANTHER MULTI-COPPER OXIDASE 4 364 IPR045087 -
Tsu01g00157 371 SUPERFAMILY Cupredoxins 7 163 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g00157 Tsu-Chr1 1231238 1234393 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00157 01 1231238 1234393 Tsu01g00157 01 1231238 1234393 ECH