Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g04665 ATGATGATGTTTGATGACATGGGGTTTTGTGGTGATTTGGATATGTTTTGTGGTACACTTGGGGAAGGGGATATTTCTGTGAGACAAACCGAGCCAGATTCGGTAGTTGAGGATGATTATAGTGATGAAGAAATGGATGTGGATGAGCTTGAACGAAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAAGAGCAAACCAAGGCTAAAGAAGGAATTGACGCCGCAAAGGCAAGGCAGTCTCAGGAACAGGCAAGGAGGAAAAAGATGTCGAGAGCTCAAGATGGAATATTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCACAAGGATTTGTTTACGGGATTATTCCTGAGAAGGGAAAACCGGTGACTGGAGCATCTGACAATCTTCGTGAATGGTGGAAGGATAAGGTTCGGTTTGATAGGAATGGTCCGGCTGCCATATCCAAGTATCAAGCAGATAACGCGATTCCAGGGAAGAATGACGGATGCAATTCCATCGGTCCAACTCCTCACACCTTGCAAGAATTACAGGACACAACCTTAGGTTCTCTCTTATCTGCACTTATGCAGCACTGCGATCCTCCTCAGAGGCGTTTCCCATTAGAGAAGGGTAATCCTCCACCATGGTGGCCAACCGGTAACGAAGAGTGGTGGCCACAGATTGGTTTGCCTAAAGATCAAGGCCCTCCGCCTTACAAGAAACCTCATGATCTGAAAAAAGCATGGAAAGTCGGTGTTCTAACTGCGGTTATCAAGCATATGTCTCCTGATATAGCCAAGATTCGCAAGCTCGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACGGCCAAGGAAAGTGCAACATGGCTTGCTATCATCAACCAAGAGGAGGCCCTGGCTCGAGAGCTTTATCCCGATTATTGCCCCCCGTTATCCTCTAGTGGAGGTAGTGGTTCTACGGTCATCAATGATTGCAGCGAGTATGATGTTGATGGAGCTGAGGATGAGTCAAACTTTGACGTGGATGACCGAAAACCTGAGCATCTTCATCCATCCAATCTTGGGATGGACATAATGAGGGGAAGGTTTCCAGTTCAGCAACCTTCTCCAATCAAGGGCGAGGTTGAGGTTATCACAAGCTTGGATTTCATTCGGAAGAGGAAGATCTCTAGCGAATTTAACATGATGATGGATCAGAAAATCTACACATGTGAACATCCTCAATGTCCTTATAGTGAAATCCGCCTCGCCTTTCAAGACAGGTCTTCTAGGGACAATCATCAATTAAACTGTCCATACAGAAACAGTTCCGCAGGTTATGGTGGCCCTAACTTTCACGTTACCGAGGTTAAGCCCGTTATTTTCCCACAAAGCTTTGTTCAACCCAATCCTACAGCTCAGTCTGCTACTTTGGTTCCACCATCATTCGATTTAACCGGACTTGGAGTTTCGGAGGACGGCCAGAAAATGATCAGCGACCTAATGTCAGTCTATGATACCGATATTATAGCAAACAAGAATGCAAGTTCCACCAATTGTATATCTGTCGAACACCAAAACCTTTCTCAGCCGATCATTCAGCCACAACAACAGGAGAATTTCTTTACGAGTCAAGGCATGCCGATGGAAGCAAACTTTTTCACTCGTGAGGAAAACCAATTTGATCGGTTCAGGGCCGTAAACACTCCATTCGAAACCAACCACCACAACAACAACAACAACAATAATATCAATCTCATGTTTGGTTCTTCATGTGATTTAACATCCTTTGATTTTAAGGAGGATCTACAACTACAAGGAGGAGGAGTAGGAATGGATACACTTTACAAACAACCAGATGTTTCAATATGGTACAACTGA 1854 0.4466 MMMFDDMGFCGDLDMFCGTLGEGDISVRQTEPDSVVEDDYSDEEMDVDELERRMWRDKMRLKRLKEQTKAKEGIDAAKARQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAISKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGNPPPWWPTGNEEWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLSSSGGSGSTVINDCSEYDVDGAEDESNFDVDDRKPEHLHPSNLGMDIMRGRFPVQQPSPIKGEVEVITSLDFIRKRKISSEFNMMMDQKIYTCEHPQCPYSEIRLAFQDRSSRDNHQLNCPYRNSSAGYGGPNFHVTEVKPVIFPQSFVQPNPTAQSATLVPPSFDLTGLGVSEDGQKMISDLMSVYDTDIIANKNASSTNCISVEHQNLSQPIIQPQQQENFFTSQGMPMEANFFTREENQFDRFRAVNTPFETNHHNNNNNNNINLMFGSSCDLTSFDFKEDLQLQGGGVGMDTLYKQPDVSIWYN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g04665 617 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Trre9g04665 617 FunFam Ethylene insensitive 3-like 1 168 305 - -
Trre9g04665 617 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700|GO:0005634
Trre9g04665 617 Coils Coil 47 67 - -
Trre9g04665 617 FunFam Ethylene insensitive 3-like 1 80 158 - -
Trre9g04665 617 Gene3D - 80 157 IPR023278 GO:0003700|GO:0005634
Trre9g04665 617 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 594 IPR006957 GO:0003700|GO:0005634
Trre9g04665 617 MobiDBLite consensus disorder prediction 70 90 - -
Trre9g04665 617 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g04665 Trre-Chr9 53629308 53631161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g04665 2 616 EIL Transcription Factor Family AT3G20770 61.111 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre9g04665 EIN3 4.7e-130 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02621 5 20522447 20524399 Trre9g04665 9 53629308 53631161 PCT