Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03448 ATGAGCTTCTCACAGTCTCACTACATGGATGATGAATATGAGAAACTCTTTAGGAGAATGAACCCTCCTAGGGTTGTAATTGATAATGAAGCCTGCAAGAATGCCACTGTTATAAGGGTTGATAGTGCAAACAAACAAGGAATACTTCTTGAAGTTGTTCAAATCCTCACTGATTTAAATCTCATTATTCTTAAGGCTTATATATCTTCTGATGGTGGATGGTTTATGGATGTTTTTAATGTAACTGACCAAGATGGAAACAAGGTCACAGATGAAGTCATTTTGGATTACATTAGAAAGTCTCTTGGTCCGGAATCTTGCTTTCCGACTACTATGAGATCTGTTGGTGTTAAACAAACAATGGACCACACTGCAATAGAGCTTATGGGAAGTGATAGGCCGGGATTGCTCTCAGAAGTTAGCGCTGTTCTCACAAACCTCAAATGCAACATAGTGAATGCCGAGGTTTGGACTCACAACATGCGTGCAGCCGCTGTAATGCATGTGACCGATGAGGAAACCGGTTCTGCTATAACCGACTCTCAGAGGCTTTCGTTAATCAAGGAGCTTCTATCCAATGTGCTTGGTGGTGGAAATAGGAAAAGGGGTGCCAAGACTGTTGTTACTGATGATTCAACGCATACTGATAGAAGGCTTCATCAGATGATGTTTGATGATAGGGATTACGAACGTGTTGACGATGATGACTTTGATGAGAAACAAAGACCAAATGTTGATGTTGTGAATTGGTCTGATAAAGATTATTCTGTTGTTACTATTGAATGTAAGGATCGGCCAAAGCTTTTGTTCGACACGGTTTGTACTTTAACAGATATGCAATATGTGGTTTTTCATGCCAACATTGATGCTGAGGGGCCACAAGCATATCAGGAATATTACATCAAGCATATCGACGGATCTCCTGTAAAATCAGATGCAGAAAGACAAAGAGTGATACATTGTCTTGAAGCTGCAATTGAGAGAAGAGTTTCTGAGGGATTGAAGCTAGAACTTTGCACAACCGACAGAGTTGGACTATTATCAAATGTGACACGTATCTTTAGAGAGAATAGTCTAACAGTTACAAGAGCAGAAGTAACAACAAAAGGAGGAAAAGCTGTTAATACTTTCTATGTTCGTGGAGCTTCTGGTTGTAATGTTGATTCTAAGACCATTGAATCTATTAGACAAACAATTGGTAACACAATACTAAAAGTTAAGGGTAGTTCTGAATCTGTACCTCAAGATTCTCCTACAAGATCTTCTATCTTTAGTGGTCTTTTCAAGTCTAGATCTTTTGTTAACTTTGGTTTGGTTAAATCTTACTCTTGA 1332 0.3889 MSFSQSHYMDDEYEKLFRRMNPPRVVIDNEACKNATVIRVDSANKQGILLEVVQILTDLNLIILKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFPTTMRSVGVKQTMDHTAIELMGSDRPGLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLSNVLGGGNRKRGAKTVVTDDSTHTDRRLHQMMFDDRDYERVDDDDFDEKQRPNVDVVNWSDKDYSVVTIECKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVKSDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGGKAVNTFYVRGASGCNVDSKTIESIRQTIGNTILKVKGSSESVPQDSPTRSSIFSGLFKSRSFVNFGLVKSYS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03448 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 408 IPR040217 -
Trre9g03448 443 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
Trre9g03448 443 Gene3D - 120 193 - -
Trre9g03448 443 Pfam ACT domain 126 177 IPR002912 -
Trre9g03448 443 ProSiteProfiles ACT domain profile. 335 411 IPR002912 -
Trre9g03448 443 CDD ACT_ACR_3 255 329 - -
Trre9g03448 443 CDD ACT_ACR_1 35 105 - -
Trre9g03448 443 SUPERFAMILY ACT-like 120 192 IPR045865 -
Trre9g03448 443 SUPERFAMILY ACT-like 32 100 IPR045865 -
Trre9g03448 443 ProSiteProfiles ACT domain profile. 125 212 IPR002912 -
Trre9g03448 443 SUPERFAMILY ACT-like 331 400 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03448 Trre-Chr9 43238972 43241766 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03448 9 43238972 43241766 Trre9g03448 9 43238972 43241766 ECH