Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03319 ATGCCTTTCCCCCTTTTTCTCTTTCTCTTCTTCATACTCACCACCGTTTCCACCGCTCTCCCTTACGGTATCTCTTACCATATTGACTGTGGTAGTCCAACAAACACCACCGACTCATTCAACACAACATGGCTCTCCGACCGTTTCTTCACCGGCGGAACAACCGGAATAGTCTCCGAGCCACTTCATTTCCACCACCAACACGAAAAAACTCTCCGTCTCTTCCCAATCTCATCCGGTAAAAAGAATTGCTACTCCATCTCTTCACTCTCATCTTCACGCTACCTCATTCGTACTTTCGTCGTTTACGATAACTACGACGGAAAATCGCATCCTCCTTCATTTGATGTATCCGTTAGCGGCACCGTTGTTTTCTCCTGGCGTTCACCTTGGCCTCAATCTCTTTCCCGTGACGGAGCTTATTCTGACCTATTCGCTTCGTTTCGAGATGAAGCTCTAATTTGTTTCTACAGCTTTGCTACTGATCCTCCGGTGATTTCATCGCTTGAGCTTTTCGCCGTCGATCCCGCTTCCTATGATTCTGCTTCCATTGCTAATAATGATACTATACTTGTTAACTATGGGAGACTCTCTTGCGGTTCGAATCAGTGGGGTCCGGGATTCACCAACGATGATGATCGGTTCGGAAGATCGTGGCAGTCGGATTCCGATTATCGAACCGGAAAAAACAAGGTAGTTGCGGTATCCACTAGGAGTAGCATTAGGGGAACTGATCAGAAGCCGAATTACTTTCCGGCAAAGCTGTACCAGACCGCGGTAACTACCGCAGAGACTGCGGAGGAGGGAGGTGGCGTTTTGGAGTATGAATTGAATGTGGATGCTAAGCTGGATTACCTTGTGTGGTTGCATTTTGCGGAGATAGAGGATAAAGTGAAAAAAGCTGGAGAGAGAGTGTTTGATGTTTTCATCAATGGAGATAATTTGACAAGAGTAGATATTTACAAACAAGTGGGAAGTTTAGCTGCGTTTACTTGGCATCATATGGTGAAGAATTTGAGTAGTAGCGTGTTGAGTGTGAAGCTTGTTGGGGTTTTTGGTGCACCTATCATTTGTGGAATTGAGAATTATGCTTTGGTTCCTGATGATCCTTCTACCGTTCCTCAACAAGTGGTTGCCATGAAAGCACTGAAAGATTCACTTCGGGTTCCTGAAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGTATGAGTAAGGATAATTCTGCTCTTGTCATAAGTCAAATAGATCTGGGCAGTCAAGGCTTGAAAGGGTTCATAAGTGAGCAGATTAGTCTTTTGTCGGACTTGGTAAGCCTGAACTTGAGTTCTAATTCGTTGGTGGGTGAAGTACCGTCTGGCCTAGGTCAAAAATCCCTGATACACTTGGACTTGTCCAACAATCAGTTAACAGGCTCGATTCCAGATAGTATAGCTTCTTCAAGTTTGCAGCTTGTGTTATTGAATGGTAACTTATTGGAAGGACAAGTGCCGGATGAACTCTATTCGATTGGTGTGCATGGTGGAGCCATTGATCTCTCTGCCAACAAAGGTTTGTGCGGTGTACCATCTCTGCCAGCTTGTCCTATGTTTTGGAAGAATGGCAGATTATCCACCGAGGGAAAGATTGCAATAGGCGTGTCAAGTCTTTTTGTTTTCTGTTTGATACTACTGGTGGTCTATATCTATATCAGGAGGAGAAGGAATGATTATGACTTTGCTCTGCCTCATGAATTAACAGCATTAGCAGCCAAGCGAAACAGATATCAGAGGCAAAAATCCTTGATGGTTCTTGAGATGGAAAGTCAACATGCTAAGGGACTACCTTCACCTTCTGCCACACAATAA 1881 0.4482 MPFPLFLFLFFILTTVSTALPYGISYHIDCGSPTNTTDSFNTTWLSDRFFTGGTTGIVSEPLHFHHQHEKTLRLFPISSGKKNCYSISSLSSSRYLIRTFVVYDNYDGKSHPPSFDVSVSGTVVFSWRSPWPQSLSRDGAYSDLFASFRDEALICFYSFATDPPVISSLELFAVDPASYDSASIANNDTILVNYGRLSCGSNQWGPGFTNDDDRFGRSWQSDSDYRTGKNKVVAVSTRSSIRGTDQKPNYFPAKLYQTAVTTAETAEEGGGVLEYELNVDAKLDYLVWLHFAEIEDKVKKAGERVFDVFINGDNLTRVDIYKQVGSLAAFTWHHMVKNLSSSVLSVKLVGVFGAPIICGIENYALVPDDPSTVPQQVVAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNSALVISQIDLGSQGLKGFISEQISLLSDLVSLNLSSNSLVGEVPSGLGQKSLIHLDLSNNQLTGSIPDSIASSSLQLVLLNGNLLEGQVPDELYSIGVHGGAIDLSANKGLCGVPSLPACPMFWKNGRLSTEGKIAIGVSSLFVFCLILLVVYIYIRRRRNDYDFALPHELTALAAKRNRYQRQKSLMVLEMESQHAKGLPSPSATQ 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03319 626 FunFam Putative LRR receptor-like serine/threonine-protein kinase 374 540 - -
Trre9g03319 626 Gene3D Ribonuclease Inhibitor 376 541 IPR032675 -
Trre9g03319 626 FunFam Di-glucose binding protein with Leucine-rich repeat domain 196 363 - -
Trre9g03319 626 PANTHER OS07G0107800 PROTEIN-RELATED 27 595 - -
Trre9g03319 626 Gene3D - 195 364 - -
Trre9g03319 626 SUPERFAMILY L domain-like 372 513 - -
Trre9g03319 626 ProSiteProfiles Leucine-rich repeat profile. 470 492 IPR001611 GO:0005515
Trre9g03319 626 Pfam Malectin-like domain 28 364 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03319 Trre-Chr9 41890901 41898440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03319 28 493 Receptor kinase-like Gene Family AT1G05700 30.123 3.85e-36 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03319 9 41890901 41898440 Trre9g03319 9 41890901 41898440 ECH