Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03302 ATGAAGACTGCGATTTGTCGGAGCATCGGCCTCTCTCCCAATCACCTCTTCATATCAGGGGATAGATATTCTTTTTGTAAGGGCCCATGCTCCAATCTGTGTGTTCCCATGGCTGTATTAATAAAAGGATCTGGTAAAGGGGGAGGGATCCTGGAAAAGCCCGTTATTGAAAAAGCCACCCCAGGCCGGGAATCTGAATTTGATTTGAAGAAATCACGGAAAACAGCACCACCATATCGTGTAATATTACACAATGATAACTACAATAAACGGGAGTATGTCGTCCAAGTACTTATGAAGGTGATCCCTGGAATGACCCTTGATAATGCGGTTAACATCATGCAAGAAGCTCACCACAATGGAATGTCAGTGGTGATTATTTGTGCTCAAGCTGATGCTGAAGATCATTGCATGCAACTTAGAGGCAATGGGTTACTCAGTTCAATTGAACCTGCAGGTGCTGGTTGTTGA 471 0.4395 MKTAICRSIGLSPNHLFISGDRYSFCKGPCSNLCVPMAVLIKGSGKGGGILEKPVIEKATPGRESEFDLKKSRKTAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHHNGMSVVIICAQADAEDHCMQLRGNGLLSSIEPAGAGC 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03302 156 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 73 151 - -
Trre9g03302 156 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 59 153 IPR022935 GO:0006508
Trre9g03302 156 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 32 156 IPR022935 GO:0006508
Trre9g03302 156 Pfam ATP-dependent Clp protease adaptor protein ClpS 75 142 IPR003769 GO:0030163
Trre9g03302 156 SUPERFAMILY ClpS-like 73 150 IPR014719 -
Trre9g03302 156 Gene3D - 56 154 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03302 Trre-Chr9 41651970 41655895 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03302 9 41651970 41655895 Trre9g03302 9 41651970 41655895 ECH