Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03238 ATGGAGCTATCAAAGACATTCAGATTCCAATCACAGAACCTTTCATCCTTCATACCTTTCTTTCCTTTGAAGAATCAACTACCCTTTACAACAAAACTCATCAATAAACCAAAGATAACCAGATTAACAGTGACAGCTAAGAGAAAACCACCAATTGAAGGGGTGGTTAGTGAAGAGTTGAACAATATAGCTTCTTATAACCTTGATTTTGCATATTCTAGAAGAAGGGTTCGTTCAGCTTTTACTGAAGTTCATCAACAGCTTGATCATTGCTTGTTTAAGGATGCTCCTGCTGGAATTAGAACAGAAGAATGGTATGAAAGGAATTCGAGGGGATTGGAAATTTTCTGCAAAAGTTGGATTCCAGAGCCAGGAATTCCAGTTAAGGCCTCTGTCTGTTTTTGTCATGGATATGGTGATACTTGCACATTCTTCTTTGAAGGCGTAGCTAGGAGAATTGCTGCATCTGGGTATGCTGTTTTCGCGATGGACTATCCAGGTTTCGGATTATCAGAAGGATTACATGGTTACATACCAAATTTTGATGATCTAGTCGACGATGTTATAGAGCATTATACACAAATAAAAGCGAGGCCTGATATGAGAGAATTACCTCGATTTCTGTTGGGACAGTCAATGGGCGGGGCGGTTTCGCTTAAAGTTCATTTGAAGGAGCCATATAATTGGGATGGAGTTGTACTTGTAGCACCAATGTGTAAAATTGCAGATGATGTGTTACCACCTGATGCAGTAATGAAGGTGTTAACTCTTTTGTCAAAAGTGATGCCAAAAGCAAAACTCTTCCCAAACCAAGACCTAGCTGAGCTAGCAATCCGAGAACCGAGCAAAAGAAAATTGGCTGTTTACAATGTTATTTGTTACGAGGATAACCCTCGACTGAGAACCGGCATGGAACTTTTACGGATCACAAAAGAAATTGAGTCAAACGTAGAGAAGGTGTCAGCACCATTATTGGTTCTTCATGGAGCTGCAGACAAAGTAACAGATCCATTAGTGAGTCTATTTCTATATGAAAATGCATCTAGCAAAGATAAGACATTAAAGCTTTATGAAAATGGTTATCACTGCATTTTGGAAGGAGAACCTGATGATAGGATATATGCTATACATGATGATATTGTGTCATGGCTTGATTCTAGGTGTTCAATTAAGTGA 1176 0.3895 MELSKTFRFQSQNLSSFIPFFPLKNQLPFTTKLINKPKITRLTVTAKRKPPIEGVVSEELNNIASYNLDFAYSRRRVRSAFTEVHQQLDHCLFKDAPAGIRTEEWYERNSRGLEIFCKSWIPEPGIPVKASVCFCHGYGDTCTFFFEGVARRIAASGYAVFAMDYPGFGLSEGLHGYIPNFDDLVDDVIEHYTQIKARPDMRELPRFLLGQSMGGAVSLKVHLKEPYNWDGVVLVAPMCKIADDVLPPDAVMKVLTLLSKVMPKAKLFPNQDLAELAIREPSKRKLAVYNVICYEDNPRLRTGMELLRITKEIESNVEKVSAPLLVLHGAADKVTDPLVSLFLYENASSKDKTLKLYENGYHCILEGEPDDRIYAIHDDIVSWLDSRCSIK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03238 391 Gene3D alpha/beta hydrolase 98 389 IPR029058 -
Trre9g03238 391 PANTHER PHOSPHOLIPASE-RELATED 97 387 - -
Trre9g03238 391 PRINTS Alpha/beta hydrolase fold signature 208 221 IPR000073 -
Trre9g03238 391 PRINTS Alpha/beta hydrolase fold signature 157 172 IPR000073 -
Trre9g03238 391 PRINTS Alpha/beta hydrolase fold signature 324 338 IPR000073 -
Trre9g03238 391 SUPERFAMILY alpha/beta-Hydrolases 88 386 IPR029058 -
Trre9g03238 391 FunFam Alpha/beta-Hydrolases superfamily protein 98 390 - -
Trre9g03238 391 Pfam Serine aminopeptidase, S33 128 369 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03238 Trre-Chr9 41028152 41031269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03238 28 391 Acyl Lipid Metabolism Gene Families AT1G77420 60.763 7.61e-170 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03238 9 41028152 41031269 Trre9g03238 9 41028152 41031269 ECH