Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01929 ATGGGTCTCGCTTGGAATCAACGAGGCTCGAGAACAGAAACAACAACAACAACACAAGAGGGTTTACCTGTTTCCGTTGGTGTTGCTGTTCCGAAGAAAAAATGGTCGAATTTGATGCCTTTATTTGTGGCTCTTGTGGTAATTGCAGAGATCGCGTTTTTGGGTAGGTTAGATATGGCGAAGAATGCAGCTATGGTTGCTGACTTGTTCTACAGGTCTCGTGTGGTTGTTGAAAATGATGATTTGGGGTTAGAGATGATTGGTGGTATTAAGAATTTTGAATCAGAGATAGAAAGCTGTGAGGAATGGTTGGAAAGGGAAGATGCTGTTACATATTCAAGAGACTTTGTTAAGGAACCTGTTTTTGTTTCTGGAGCTGATCAGGAGTGGAAATCATGTTCAGTGGGATGTAAATTTGGATTTAATGGGAACCAGAAACCTGATGCTGCATTTGGCTTACCTCAACAAGCTGGAACTGCAAGTGTTCTACGATCAATGGAATCAGCACAATACTATGCAGAGAACAATATTGACATGGCTCGACGGAGGGGATATAACCTTGTAATGACAACAAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCATGGGCCGAATATGACATCATGGCACCGGTGAAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCATTCATTTCGAACTGTGGTGCTCGAAATTTCCGATTGCAAGCTCTTGAAGCCCTTGAAAAAACAAACGTCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGAGATGGACGAGCAGTGGACAAAGTGGAAACCCTGACGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCACTTGTTGCTGGAACTATCCCTGTGGTTGTCGGTCCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGGTTCAGTTTTACATATTAAAGAACTAACAGATGTTGAATCTGTTGCCAAGACAATGAGATATCTAGCAGAAAACCCTAAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGGCCATCTGATTCCTTCAAGGCCCTAGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACGAAGAGTAGAGAGACGGAAGAAAAGAGTCCAGACTTCAAGAAACGTCCTTGCAAGTGCACTAGAGGGTCAAAAACTGTATATCATATCTATGTGAGAGAAAGGGGAACATTTGAAATGGAGTCCATTTACTTGAGATCTAGCAATTTGACTATGGAGGCCTTCAAGTCTGCTGTTCTTAAGAAGTTCACGTCCCTAAATCATGTTCCTGTATGGAAGCCTGAAAGACCTGAAATGCTAAAAGGTGGCGATGAATTAAAGATTTACAAAATATACCCTGTCGGTTTGACACAGAGACAAGCTCTTTATACCTTCCACTTCGATGGGGATGCTGATTTCCGACGTCACTTGGAAAACAATCCCTGCGCCAAATTTGAAGTCATTTTTGTGTAG 1536 0.4167 MGLAWNQRGSRTETTTTTQEGLPVSVGVAVPKKKWSNLMPLFVALVVIAEIAFLGRLDMAKNAAMVADLFYRSRVVVENDDLGLEMIGGIKNFESEIESCEEWLEREDAVTYSRDFVKEPVFVSGADQEWKSCSVGCKFGFNGNQKPDAAFGLPQQAGTASVLRSMESAQYYAENNIDMARRRGYNLVMTTSLSSDVPVGYFSWAEYDIMAPVKPKTEKALAAAFISNCGARNFRLQALEALEKTNVSIDSYGGCHRNRDGRAVDKVETLTHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPSPGSVLHIKELTDVESVAKTMRYLAENPKAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSRETEEKSPDFKKRPCKCTRGSKTVYHIYVRERGTFEMESIYLRSSNLTMEAFKSAVLKKFTSLNHVPVWKPERPEMLKGGDELKIYKIYPVGLTQRQALYTFHFDGDADFRRHLENNPCAKFEVIFV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01929 511 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 46 459 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre8g01929 511 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 385 - -
Trre8g01929 511 Gene3D - 164 360 IPR038577 -
Trre8g01929 511 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 218 388 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre8g01929 511 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 167 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01929 Trre-Chr8 15359933 15364591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01929 1 511 Xyloglucan Fucosyltransferase1 AT3G19280 64.740 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01929 K00753 - gmx:100776065 838.95