Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g01928 ATGGGTCTCGCTTGGAATCAACGAGGCTCGAGAACAGAAACAACAACAACAACACAAGAGGGTTTACCTGTTTCCGTTGGTGTTGCTGTTCCGAAGAAAAAATGGTCGAATTTGATGCCTTTATTTGTGGCTCTTGTGGTAATTGCAGAGATCGCGTTTTTGGGTAGGTTAGATATGGCGAAGAATGCAGCTATGGTTGCTGACTTGTTCTACAGGTCTCGTGTGGTTGTTGAAAATGATGATTTGGGGTTAGAGATGATTGGTGGTATTAAGAATTTTGAATCAGAGATAGAAAGCTGTGAGGAATGGTTGGAAAGGGAAGATGCTGTTACATATTCAAGAGACTTTGTTAAGGAACCTGTTTTTGTTTCTGGAGCTGATCAGGAGTGGAAATCATGTTCAGTGGGATGTAAATTTGGATTTAATGGGAACCAGAAACCTGATGCTGCATTTGGCTTACCTCAACAAGCTGGAACTGCAAGTGTTCTACGATCAATGGAATCAGCACAATACTATGCAGAGAACAATATTGACATGGCTCGACGGAGGGGATATAACCTTGTAATGACAACAAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCATGGGCCGAATATGACATCATGGCACCGGTGAAGCCAAAAACTGAAAAAGCTCTTGCAGCTGCATTCATTTCGAACTGTGGTGCTCGAAATTTCCGATTGCAAGCTCTTGAAGCCCTTGAAAAAACAAACGTCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGAGATGGACGAGTGGACAAAGTGGAAACCCTGACGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCACTTGTTGCTGGAACTATCCCTGTGGTTGTCGGTCCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGGTTCAGTTTTACATATTAAAGAACTAACAGATGTTGAATCTGTTGCCAAGACAATGAGATATCTAGCAGAAAACCCTAAAGCATATAATCAATCATTGAGGTGGAAGTATGAGGGGCCATCTGATTCCTTCAAGGCCCTAGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACGAAGAGTAGAGAGACGGAAGAAAAGAGTCCAGACTTCAAGAAACGTCCTTGCAAGTGCACTAGAGGGTCAAAAACTGTATATCATATCTATGTGAGAGAAAGGGGAACATTTGAAATGGAGTCCATTTACTTGAGATCTAGCAATTTGACTATGGAGGCCTTCAAGTCTGCTGTTCTTAAGAAGTTCACGTCCCTAAATCATGTTCCTGTATGGAAGCCTGAAAGACCTGAAATGCTAAAAGGTGGCGATGAATTAAAGATTTACAAAATATACCCTGTCGGTTTGACACAGAGACAAGCTCTTTATACCTTCCACTTCGATGGGGATGCTGATTTCCGACGTCACTTGGAAAACAATCCCTGCGCCAAATTTGAAGTCATTTTTGTGTAG 1533 0.4162 MGLAWNQRGSRTETTTTTQEGLPVSVGVAVPKKKWSNLMPLFVALVVIAEIAFLGRLDMAKNAAMVADLFYRSRVVVENDDLGLEMIGGIKNFESEIESCEEWLEREDAVTYSRDFVKEPVFVSGADQEWKSCSVGCKFGFNGNQKPDAAFGLPQQAGTASVLRSMESAQYYAENNIDMARRRGYNLVMTTSLSSDVPVGYFSWAEYDIMAPVKPKTEKALAAAFISNCGARNFRLQALEALEKTNVSIDSYGGCHRNRDGRVDKVETLTHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPSPGSVLHIKELTDVESVAKTMRYLAENPKAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATKSRETEEKSPDFKKRPCKCTRGSKTVYHIYVRERGTFEMESIYLRSSNLTMEAFKSAVLKKFTSLNHVPVWKPERPEMLKGGDELKIYKIYPVGLTQRQALYTFHFDGDADFRRHLENNPCAKFEVIFV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g01928 510 Gene3D - 164 359 IPR038577 -
Trre8g01928 510 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 46 458 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre8g01928 510 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 167 359 - -
Trre8g01928 510 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 384 - -
Trre8g01928 510 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 218 387 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g01928 Trre-Chr8 15359933 15364591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g01928 1 510 Xyloglucan Fucosyltransferase1 AT3G19280 64.865 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g01928 K00753 - gmx:100776065 843.573