Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00098 ATGGAAGCATATTCCATGAGACTCAAAATATCCTTTATTGTGAGTTTGATAGCTTTCTCTATAGTTATCATGGTTACCTTAATGTACCAAAACTCTAGTTTGGGGCTATTTGAAGGGTTTTCAAAAGGCATGGCAATGGGAGGAATGGCTCATAAGAACGTTACAGCTGGAGGACCAAATGTTACAACTAATAATGAGTTTGGATTGAGATCAAATGTAACACTTGACAACTTTGGAGGAAGAGAAAAGGGTGATGTCAAAATCAAAAGCTCCAAAAGTATCCCATTGACAAATTCAACTTCAACTCCATCTAAAGAGATCACTAATGATGATAATGGCAAATTGCTTGATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGGTCACAATCACATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTAAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGCAAATTCTAAAGAAAATAGTACAAATTCTGCTGCAACAACTTGCAAATACATTATTTGGTTACCTACAAATGGTTTAGGTAACCAAATAATTAGCATGGCTTCATCATTTCTTTATGCACTTCTAACGGATCGTGTTTTGCTCGTACAATTTGGGAAAGATAAAGAAGGTTTATTTTGCGAACCATTTCTAAATTCAACATGGTTACTACCAGAGAATTTCCCCTTTTGGGATGCGCAAAATGTTCTAGAATATCAAGGCATAATTGAGATGGAAATGACTAATACATTAAATGAATATTTGCCATCAGCTATATATGTGGATCTAAAATACAGTCCTACACATGATGAGAGATTTTTTCACTGCGACCACAGTCAATTTCTTCTCAGTCAAATTCCTCTATTGTTTTTGGAAGCAGGTCAATATTTTGTACCTTCATTTTTCATGACGCCAATTTTCAAAGAAGAGTTAAACAAAATGTTTCCAGAAATTACCTCAATTTTTCACCATTTGGGACGCTATCTATTTCACCCCGCAAATGAAGCATGGGAACAAATAACTAGTTTCTATCAACAACACCTTGCTAAAGCAAATGAGAGAATTGGGCTTCAAATAAGAGTGGTTAATCCTGAATCAACTCCACACAAAATTGTTATGAATCAAATTTTGAATTGCACATTGGAGAATAAGTTACTTCCAAAAGTATGTGGTACCAAAAATATGTCAGACTCTTCTAGCGACAAAAACAAGACGATTAAAAAGGTTGTTCTTGTGACATCTTTATATCCACAATATGGAAATAATTTAAAGAAGATTTATCAGCATAAATCAACAGTTACCGGGGAAGTAATTGAGGTTTATCAACCAAGTAGTGAAAAGGAACAAAAATTTGGTGATAACAAGCATAATTTGAAGGCTTGGGTTGAAATGTATTTACTAAGTTTATCTGATGTGCTGGTGACTACATACCAATCAACTTTTGGTTATGTTGCTAAGGCCTTGGGAAATTCAATACCATGGATTCTTTATAATCCAGTTTATAATGAAAATAAGGAGATTTGTGAACGTGAGTTTACATATGAGCCTTGTTATCATTATCCTCCTTTACATTATTGTGATGGAAAAGTTATTGAAGATGTTGCTTCTTCTTTTCATAATATTAGACATTGTAAAGATTTTCCTTTTGGTTTGAAGCTGGTAAACAGTTCTGTTTAG 1749 0.3373 MEAYSMRLKISFIVSLIAFSIVIMVTLMYQNSSLGLFEGFSKGMAMGGMAHKNVTAGGPNVTTNNEFGLRSNVTLDNFGGREKGDVKIKSSKSIPLTNSTSTPSKEITNDDNGKLLDGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNKDMKIIANSKENSTNSAATTCKYIIWLPTNGLGNQIISMASSFLYALLTDRVLLVQFGKDKEGLFCEPFLNSTWLLPENFPFWDAQNVLEYQGIIEMEMTNTLNEYLPSAIYVDLKYSPTHDERFFHCDHSQFLLSQIPLLFLEAGQYFVPSFFMTPIFKEELNKMFPEITSIFHHLGRYLFHPANEAWEQITSFYQQHLAKANERIGLQIRVVNPESTPHKIVMNQILNCTLENKLLPKVCGTKNMSDSSSDKNKTIKKVVLVTSLYPQYGNNLKKIYQHKSTVTGEVIEVYQPSSEKEQKFGDNKHNLKAWVEMYLLSLSDVLVTTYQSTFGYVAKALGNSIPWILYNPVYNENKEICEREFTYEPCYHYPPLHYCDGKVIEDVASSFHNIRHCKDFPFGLKLVNSSV 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00098 582 Pfam Xyloglucan fucosyltransferase 102 550 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre8g00098 582 Gene3D - 359 532 - -
Trre8g00098 582 Gene3D - 190 244 - -
Trre8g00098 582 PANTHER FUCOSYLTRANSFERASE 2-RELATED 32 579 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre8g00098 582 FunFam Galactoside 2-alpha-L-fucosyltransferase 191 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00098 Trre-Chr8 687573 689943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00098 107 578 Xyloglucan Fucosyltransferase1 AT2G03220 46.473 8.61e-148 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00098 K13681 - gmx:100818288 647.506