Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00096 ATGGGAGGAATGACTCATGCGACCGTTGAAGCTGGAGTATCAAATGTTACAACTAATGAGTTTGATTTGAGACAAAATGTAACACATGACAACTTTGGAGGAAGACACAAGAGTGATTCCATTTTCAAAAGCTCCAAAAGTATCCCATTGACAAATTCAACTTCAACTCCATCTAAAGAGATCACTGATGATGACAATGGCAAATTGCTTAATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGATCACAATCGCATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTAAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGTAACCTCTAAGTCAAATGGTACTCATTGTGCTGCAACAACATGCAAATACATTATTTGGGTACCTGTAAATGGTTTAGGTAACCAAATAATTAGTATGGCTTCAACATTTCTTTACGCGATCCTAACGGAACGTGTTTTGCTCGTACAAGGGAATGACATAGAAGGTTTATTTTGTGAACCATTTCTAAATTCAACTTGGTTGTTGCCGAAAGATTCTCCTTTTTGGAATAATGAAAATAATAGGGAAAATGTTCAAGCATATCAAAGCACAATTGAGAAGGATATGAATCATACATTGAATGAAGATTTGCCATCAACTATGTTTATGGATCTAAAATTTACGGGTACATTTGAAGAGAGATTCTTTCACTGTGACCATAGCCAATTTCTTCTCAGTAAAATTCCTTTGTTGTCTTTGACATCAGGTCAATATTTTGTACCTGCATTTTTTATGACACCAATTTTTCAAAAAGAGTTAAACAAAATGTTTCCAGAAATAACCTCGATTTTTCACCATTTGGGACGTTATCTTTTTCACCCTTCAAATGAAGCATGGGAACAAATCACAAATTTCTATCAACAACACCTTGCTAAAGCAAATGAGAGAATTGGACTTCAAATAAGAGTTTTTGAACCCGATTCAACTCCTCAACAAGTTGTTATGAATCAAGTTTTGAATTGCACGTTAGAGAATAAATTACTTCCAAAAATACTTGATACAAAAAATATATCATTGTATTCTAGTGAAAAAAACAAGACAAATACTAAGGTCGTTCTTGTGGCATCATTATATCCACAATATGGAAACAATTTAAAGACAATGTATCAGAATAAATCAACAGTTACCGGGGAAGTAATTGAAGTTTATCAACCAAGTGGTGAAGAGGAACAAAAATTTGGTGATAATAAGCATAATTTGAAGGCATGGGTTGATATTTATTTACTAAGTTTATCTGATGTGTTGGTGACTACATATCAATCAACTTTTGGTTATGTTGCTAAGGGTTTGGGAAATTCAAGACCATGGATTCTTTACAATCCGGTTAATAATCAAAATAAGGAGATTTGTGAAGCTGAGTTTACAAAGGAGCCTTGTTATCATTATGCTCCTTTACATCATTGCAATGGAACGAAATTTAAAGATATTTCTTCTTCTTTTCATAATATTAGACATTGTAAAGATTATCCTTTTGGTGTGAAGCTGGTTAAAAGTTCTGTTTAG 1620 0.3315 MGGMTHATVEAGVSNVTTNEFDLRQNVTHDNFGGRHKSDSIFKSSKSIPLTNSTSTPSKEITDDDNGKLLNGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNKDMKIIVTSKSNGTHCAATTCKYIIWVPVNGLGNQIISMASTFLYAILTERVLLVQGNDIEGLFCEPFLNSTWLLPKDSPFWNNENNRENVQAYQSTIEKDMNHTLNEDLPSTMFMDLKFTGTFEERFFHCDHSQFLLSKIPLLSLTSGQYFVPAFFMTPIFQKELNKMFPEITSIFHHLGRYLFHPSNEAWEQITNFYQQHLAKANERIGLQIRVFEPDSTPQQVVMNQVLNCTLENKLLPKILDTKNISLYSSEKNKTNTKVVLVASLYPQYGNNLKTMYQNKSTVTGEVIEVYQPSGEEEQKFGDNKHNLKAWVDIYLLSLSDVLVTTYQSTFGYVAKGLGNSRPWILYNPVNNQNKEICEAEFTKEPCYHYAPLHHCNGTKFKDISSSFHNIRHCKDYPFGVKLVKSSV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00096 539 Gene3D - 144 198 - -
Trre8g00096 539 Pfam Xyloglucan fucosyltransferase 57 507 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre8g00096 539 Gene3D - 316 493 - -
Trre8g00096 539 MobiDBLite consensus disorder prediction 29 63 - -
Trre8g00096 539 PANTHER FUCOSYLTRANSFERASE 2-RELATED 57 536 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre8g00096 539 MobiDBLite consensus disorder prediction 43 60 - -
Trre8g00096 539 FunFam Galactoside 2-alpha-L-fucosyltransferase 145 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00096 Trre-Chr8 677690 680564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00096 61 535 Xyloglucan Fucosyltransferase1 AT2G03220 45.303 2.44e-144 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00096 K13681 - gmx:100818288 621.313