Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre8g00095 ATGGAAGCAAGTTATATGAGACTTAAAATGTCTTTTATTGTGTGTTTGATAGTTTTGCCTATAGTTATCATGGTTACTTTAATGTACCAAAACTCTAGTTTTGGGCTATTTGAAGGGTTTTCAAAAGGCATGTCAATGGGAGGAATGACTCATGCGACCGTTGAAGCTGGAGTATCAAATGTTACAACTAATGAGTTTGATTTGAGACAAAATGTAACACATGACAACTTTGGAGGAAGACACAAGAGTGATTCCATTTTCAAAAGCTCCAAAAGTATCCCATTGACAAATTCAACTTCAACTCCATCTAAAGAGATCACTGATGATGACAATGGCAAATTGCTTAATGGACTATTAGTTTCTGGATTTGATGAAGCATCATGCATAAGCAGATCACAATCGCATTTCTACCACAAACCTTCTCCTCACAAACCTTCTCCATATTTGATATCTAAACTAAGAAAATATGAAGAACTTCATAGAAAATGTGGACCTAACACTAGAGCTTACAATAAAGACATGAAAATTATTGTAACCTCTAAGTCAAATGGTACTCATTGTGCTGCAACAACATGCAAATACATTATTTGGGTACCTGTAAATGGTTTAGGTAACCAAATAATTAGTATGGCTTCAACATTTCTTTACGCGATCCTAACGGAACGTGTTTTGCTCGTACAAGGGAATGACATAGAAGGTTTATTTTGTGAACCATTTCTAAATTCAACTTGGTTGTTGCCGAAAGATTCTCCTTTTTGGAATAATGAAAATAATAGGGAAAATGTTCAAGCATATCAAAGCACAATTGAGAAGGATATGAATCATACATTGAATGAAGATTTGCCATCAACTATGTTTATGGATCTAAAATTTACGGGTACATTTGAAGAGAGATTCTTTCACTGTGACCATAGCCAATTTCTTCTCAGTAAAATTCCTTTGTTGTCTTTGACATCAGGTCAATATTTTGTACCTGCATTTTTTATGACACCAATTTTTCAAAAAGAGTTAAACAAAATGTTTCCAGAAATAACCTCGATTTTTCACCATTTGGGACGTTATCTTTTTCACCCTTCAAATGAAGCATGGGAACAAATCACAAATTTCTATCAACAACACCTTGCTAAAGCAAATGAGAGAATTGGACTTCAAATAAGAGTTTTTGAACCCGATTCAACTCCTCAACAAGTTGTTATGAATCAAGTTTTGAATTGCACGTTAGAGAATAAATTACTTCCAAAAATACTTGATACAAAAAATATATCATTGTATTCTAGTGAAAAAAACAAGACAAATACTAAGGTCGTTCTTGTGGCATCATTATATCCACAATATGGAAACAATTTAAAGACAATGTATCAGAATAAATCAACAGTTACCGGGGAAGTAATTGAAGTTTATCAACCAAGTGGTGAAGAGGAACAAAAATTTGGTGATAATAAGCATAATTTGAAGGCATGGGTTGATATTTATTTACTAAGTTTATCTGATGTGTTGGTGACTACATATCAATCAACTTTTGGTTATGTTGCTAAGGGTTTGGGAAATTCAAGACCATGGATTCTTTACAATCCGGTTAATAATCAAAATAAGGAGATTTGTGAAGCTGAGTTTACAAAGGAGCCTTGTTATCATTATGCTCCTTTACATCATTGCAATGGAACGAAATTTAAAGATATTTCTTCTTCTTTTCATAATATTAGACATTGTAAAGATTATCCTTTTGGTGTGAAGCTGGTTAAAAGTTCTGTTTAG 1755 0.3305 MEASYMRLKMSFIVCLIVLPIVIMVTLMYQNSSFGLFEGFSKGMSMGGMTHATVEAGVSNVTTNEFDLRQNVTHDNFGGRHKSDSIFKSSKSIPLTNSTSTPSKEITDDDNGKLLNGLLVSGFDEASCISRSQSHFYHKPSPHKPSPYLISKLRKYEELHRKCGPNTRAYNKDMKIIVTSKSNGTHCAATTCKYIIWVPVNGLGNQIISMASTFLYAILTERVLLVQGNDIEGLFCEPFLNSTWLLPKDSPFWNNENNRENVQAYQSTIEKDMNHTLNEDLPSTMFMDLKFTGTFEERFFHCDHSQFLLSKIPLLSLTSGQYFVPAFFMTPIFQKELNKMFPEITSIFHHLGRYLFHPSNEAWEQITNFYQQHLAKANERIGLQIRVFEPDSTPQQVVMNQVLNCTLENKLLPKILDTKNISLYSSEKNKTNTKVVLVASLYPQYGNNLKTMYQNKSTVTGEVIEVYQPSGEEEQKFGDNKHNLKAWVDIYLLSLSDVLVTTYQSTFGYVAKGLGNSRPWILYNPVNNQNKEICEAEFTKEPCYHYAPLHHCNGTKFKDISSSFHNIRHCKDYPFGVKLVKSSV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre8g00095 584 PANTHER FUCOSYLTRANSFERASE 2-RELATED 14 581 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre8g00095 584 Gene3D - 189 243 - -
Trre8g00095 584 Gene3D - 361 538 - -
Trre8g00095 584 FunFam Galactoside 2-alpha-L-fucosyltransferase 190 240 - -
Trre8g00095 584 Pfam Xyloglucan fucosyltransferase 102 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre8g00095 Trre-Chr8 677555 680564 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre8g00095 106 580 Xyloglucan Fucosyltransferase1 AT2G03220 45.303 8.88e-144 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre8g00095 K13681 - gmx:100818288 655.981