Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05857 ATGGTTGCTCTGTTTCTTTTCTTCTTAGTCACACTCTTAACAACTTCAACCTCATCAATCTCCGACACGAATTCATTCATCTTCGGTGGTTGTTCTCGTCTCAAATACTCACCGGGTTCCGCTTATGAAACAAGCGTTAACTCGGTTCTAACTTCGCTAGTTGATTCATCAGGCTTCACCACCTACAACAAATTCACCGGCACCGCCGCGTCGGAAACTGTGTACGGTCTTTTTCAGTGTCGTGGAGATTTAAACAATGATCAGTGTTCAAGCTGTGTGGCGCGTGCAGTGAGTCAATTAGGGACACTCTGTTTCGCTACTTACGGTGGCGCGTTACAGCTCGAAGGATGTTTCGTAAAATACGATAATGTTTCGTTTTTTGGAGTAGAGGATAAAACAGAAGTGATCAAGAAATGTGGACCGTCGATTGGGTTGACTTCTGATGCGTTTACTCGAAGGGATGGTGTGCTGGCTTATTTACAGTCGTCCGATGGAAGTAATAAAAATTTTATGACAAATACAGTTGGGGATTTTCGTGGTGTGGCGCAGTGTACGGGGGATTTGAGTACAAGCAAGTGTCAGGATTGTGTTTCGGAGGCAATCCAACGGTTGAAAAGTGAGTGTGGGGCTTCCACGTGGGGTGATATGTATTTGGGTAAGTGCTACGTGCGTTATTCGGAAGGTGGAGATCACTCGCGAGGTAGTAACGATGATGAGAATCACAATGATGATGAAATTGAGAAGACACTAGCCATACTAATTGGACTCATTGCTGGTGTTGCTCTAATCATAGTTTTCCTTTCCTTCTTGAATAAGGTCTGCGACAAGCAGAGAGGTGGTAAATAA 846 0.4433 MVALFLFFLVTLLTTSTSSISDTNSFIFGGCSRLKYSPGSAYETSVNSVLTSLVDSSGFTTYNKFTGTAASETVYGLFQCRGDLNNDQCSSCVARAVSQLGTLCFATYGGALQLEGCFVKYDNVSFFGVEDKTEVIKKCGPSIGLTSDAFTRRDGVLAYLQSSDGSNKNFMTNTVGDFRGVAQCTGDLSTSKCQDCVSEAIQRLKSECGASTWGDMYLGKCYVRYSEGGDHSRGSNDDENHNDDEIEKTLAILIGLIAGVALIIVFLSFLNKVCDKQRGGK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05857 281 ProSiteProfiles Gnk2-homologous domain profile. 24 126 IPR002902 -
Trre7g05857 281 Pfam Salt stress response/antifungal 31 123 IPR002902 -
Trre7g05857 281 Pfam Salt stress response/antifungal 157 227 IPR002902 -
Trre7g05857 281 Gene3D - 22 126 IPR038408 -
Trre7g05857 281 Gene3D - 147 228 IPR038408 -
Trre7g05857 281 ProSiteProfiles Gnk2-homologous domain profile. 132 230 IPR002902 -
Trre7g05857 281 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 274 - -
Trre7g05857 281 FunFam cysteine-rich repeat secretory protein 3 23 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05857 Trre-Chr7 63352381 63354721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05857 1 225 Pollen Coat Proteome AT4G20670 28.099 8.38e-19 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g05857 7 63352381 63354721 Trre7g05857 7 63352381 63354721 ECH