Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g05042 ATGGTGGAAATCACTGAAGAAATTGAACTCTTTGATCAACAAAAAGAGGAAGAAGTTATAGACTATGATGAGCTGAAGAAACGCATGTGGAAGGACAGAATCCTGTTACAGAAGCTGAAGGAGAAAGGTAAAAAAGATGATCAACAAAATCAACAAGCAAAAGATGAGGCATCAAGAAGGAAAAAGATGGCAAGAGCACAAGATTCAATTCTTAAATACATGATGAAGATTATGACAACATGTAAAGCTCAAGGTTTTGTCTATGGTATTATACCAGAAAAAGGAAAACCAGTAACAGGTTCTTCTGAAAGCTTGCGTGAATGGTGGAAACAACAAGTCAAATTTAGTCAAAATGCTCCATTACAAGTTTCTAAATATTTACCAATCTTTGAAAAAAATGAACAAGAGTTGGAATTATTAGATCCAATTTCATCATATATGAATTTACTTTATGATTTACAAGATACTACTTTAGGTTCTCTTCTTTCAGCCCTAATGCAACACTGTGCACCGCCGCAACGAAGATTCCCTCTTGAAAGAGGTTTAGCTCCACCTTGGTGGCCTAATGGAACAGAACAATGGTGGGGTCAACAAGGTCTTTTGGCACAAAAACAAGGTCCACCACCTTATAAAAAACCTCATGATTTGAAAAAGGCTTGGAAAGTTTCTGTGTTGGCTGCAATTATTAAGCACTTGTCTCCTGATGTTGATAAAGTTAGAAGGTTGGTGACTCAATCAAAGACTTTGCAAGATAAGATGACAGCTAAAGATAGTGCAACTTGGTCCAAAGTTATGAACCAAGAACAAGCTTTGGTTCATCTCACTGAAAAGTGCCTCAAGATATCAGAAGAAGGTGAAAGTTCTAGTACTAATAAACATGTTTTGAATCAGTTGGAAGAATGTGGTAGCAGTGAGAAGAGGATGAAGTTTGATTCTGATGTTGATGTCGATTTTGATAAGCTATTATATTCATATCAATATGCTGAGTGTCCACAAAGTGAATTGTGTATGGGATTTTCAGACAAAAACTCAAGAATGAACGATGAATCGCTCTGTTCTAACAGAACAGAACAATTGCAAGGACATGTTCCCTTCCATGATTGGTTGAATATGGATATAGCAGGAGCTAGTAATCAGAATCAGGATGATAATAACCTTGTTGAGAATGTGAGTGAGCTGAGAGAGATTGTTGATAGGACAGTAGAAGAAGATTATGGCAGCTTCTGGCTAAATAGCATGCAAGATTTTGAATTGCACACGGGAGTCGACATGGAAAACGATAACATGGACTTGAATCAAAATCCAGCACAAGAGACAACACTGAACATTGAAGAAACCTCAATATGGGACTTGACATACAACTAA 1365 0.3692 MVEITEEIELFDQQKEEEVIDYDELKKRMWKDRILLQKLKEKGKKDDQQNQQAKDEASRRKKMARAQDSILKYMMKIMTTCKAQGFVYGIIPEKGKPVTGSSESLREWWKQQVKFSQNAPLQVSKYLPIFEKNEQELELLDPISSYMNLLYDLQDTTLGSLLSALMQHCAPPQRRFPLERGLAPPWWPNGTEQWWGQQGLLAQKQGPPPYKKPHDLKKAWKVSVLAAIIKHLSPDVDKVRRLVTQSKTLQDKMTAKDSATWSKVMNQEQALVHLTEKCLKISEEGESSSTNKHVLNQLEECGSSEKRMKFDSDVDVDFDKLLYSYQYAECPQSELCMGFSDKNSRMNDESLCSNRTEQLQGHVPFHDWLNMDIAGASNQNQDDNNLVENVSELREIVDRTVEEDYGSFWLNSMQDFELHTGVDMENDNMDLNQNPAQETTLNIEETSIWDLTYN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g05042 454 Pfam Ethylene insensitive 3 23 268 IPR047091 GO:0003700
Trre7g05042 454 FunFam Ethylene insensitive 3-like 1 142 278 - -
Trre7g05042 454 Gene3D - 52 134 IPR023278 GO:0003700|GO:0005634
Trre7g05042 454 Gene3D - 141 278 IPR023278 GO:0003700|GO:0005634
Trre7g05042 454 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 6 412 IPR006957 GO:0003700|GO:0005634
Trre7g05042 454 MobiDBLite consensus disorder prediction 41 61 - -
Trre7g05042 454 SUPERFAMILY DNA-binding domain of EIN3-like 148 272 IPR023278 GO:0003700|GO:0005634
Trre7g05042 454 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g05042 Trre-Chr7 57342233 57343597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g05042 1 451 EIL Transcription Factor Family AT5G10120 46.721 1.17e-129 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre7g05042 EIN3 1.1e-109 No_clan