Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04290 ATGTTAGTAGAATCAGCTACATTTGCTACATTTTTCACCAGAGAGCAAAAGTTATCAGAATTCAACCACAAACTTGATCAAAAACTAGCATCATCACCTACTTCTTCACAAACAAAGATGAGTAATAGGGTGTTGTACCCTAGTGAATATGGGGCAGACCCAACAGGATCAGAAGAGAGTAGTGATGCTATTATGAAAGCTGTGGAGGATGCTTATAAGTTGCAAAAGGGTATTGAATTGGTAGCAGGGGTGAATGATTTGGGAGGTGTTGTTATTGATTTGGGAGGTGGAGACTATAAAATCAGTAAACCAATTATCTTTTCACCAGGTGCTGGCAATATTGTGGTAAAAGGAGGAACCTTAAGAGCATCTGATACTTTTCCTGGTGACCGACATCTAATTGAGCTATGGTCATCAAATTCAAAGAAACTTGACACAACAGAATCTAAGCAAGGTGGTAGCTTCAATGAAATTAAAGCACAAAACAATGGAATTTACTATGAAGACATAACTTTCAGGGACATCCTCTTTGATTCAAGCTATAGAGGAGGAGGAATTTTCATCGTCGATTCTGCTAGAATCCGGATCAATAACTGTTTCTTCCTGCATTTCACAACAGAAGGAATTCTAGTACAGCAAGGACATGAGACATTCATATCGAGTTGTTTTCTTGGACAACACTCAACAGTCGGTGGAGACAAAGGTGAGAAGGATTATTCAGGTGTCGCTATTGATCTTGCTAGTAATGATAATGCAGTCACAGATGTTGCGATTTTCTCGGCAGCCGTTGGTATTGTTCTAAGGGGTCAAGCAAACATTCTATCAGGGGTGCATTGTTATAACAAGGCGGCATCGTTTGGTGGTATAGGTATCTTAGTGAAATTGGCAGGTAATTCTCTAACTAGAATTGACAACTGTTATATGGATTATACTGGTATAATAATGGAAGATCCTGTTCAAGTTCATGTCACTAATGGTTTATTTCTTGGGGATGCTAATATTTTAATAAAGTCTGTTAAAGGTCAAATTTTGGGTTTGAATATAGTTGATAATATGTTCTGTGGTGATCCTAATAAGAAGGTTCCAATTGTAAATCTAGAAGGAGAATTTAGTAATGTTGATCAAGTGGTGATTGATAGAAACAATGTGAATGGTATGAGCTTGAGATCAACGGTTGGGAAGTTAACCGTGAACAGTAACGGGACGAAGTGGGAGGCCGATTTTTCATCAGTTTTGGTATTTCCTAATAGGATTAGTCATGTTCAATATTCATTTTTTGCTCAAGGGGAGCCAAAATTTGTAGCACATTCTGTGACCAATGTGTCGGAAAATGTTGTAGTTGTGGAGAGTGAGAAAGAAGCTAAGGGTTTAGTCTTCTTCAGTGTTGAACAATAA 1395 0.3799 MLVESATFATFFTREQKLSEFNHKLDQKLASSPTSSQTKMSNRVLYPSEYGADPTGSEESSDAIMKAVEDAYKLQKGIELVAGVNDLGGVVIDLGGGDYKISKPIIFSPGAGNIVVKGGTLRASDTFPGDRHLIELWSSNSKKLDTTESKQGGSFNEIKAQNNGIYYEDITFRDILFDSSYRGGGIFIVDSARIRINNCFFLHFTTEGILVQQGHETFISSCFLGQHSTVGGDKGEKDYSGVAIDLASNDNAVTDVAIFSAAVGIVLRGQANILSGVHCYNKAASFGGIGILVKLAGNSLTRIDNCYMDYTGIIMEDPVQVHVTNGLFLGDANILIKSVKGQILGLNIVDNMFCGDPNKKVPIVNLEGEFSNVDQVVIDRNNVNGMSLRSTVGKLTVNSNGTKWEADFSSVLVFPNRISHVQYSFFAQGEPKFVAHSVTNVSENVVVVESEKEAKGLVFFSVEQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04290 464 Gene3D - 48 409 IPR012334 -
Trre7g04290 464 SUPERFAMILY Pectin lyase-like 53 402 IPR011050 -
Trre7g04290 464 PANTHER POLYGALACTURONASE QRT3 13 464 IPR039279 GO:0004650
Trre7g04290 464 FunFam Polygalacturonase QRT3 47 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04290 Trre-Chr7 50847356 50855217 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04290 7 50847356 50855217 Trre7g04290 7 50847356 50855217 ECH