Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04266 ATGAAAGGTGAGAAAGTTCCTGCATGGTTAGAAAGATTAATGGCTGAAACATTCTTTGGTGTTTGTGGGGTCCATATTAATAGAAGGAAGAACGAGAACAACATTTTTTGCTTACAATGTTGTCTTGCCATCTGCCCTCACTGTCTCCCTTCTCACCCCCATCATCCCCTTCTTCAGGTGAGAAGGTATGTTTACCATGACGTGGTTCGATTGGGTGATCTTGAAAAACTCATCGATTGTTCCAATATTCAGCCATATACAATTAACGGTGCAAAAGTGGTATTCTTAAATGAGAGGGTGCAGTCAAGGTCATGCAAAGGCAGCAGTAGCAGTAATGCCAACTCTTGCTGCTTTTGTGACAGGATTCTTCAGGAGCCCTTCCATTTCTGTTCTCTCTCATGCAAGGTTGATAACATGGTATGCATGGGTGAAAGCTTGTCGAGCATATTACATGGATTCCTTGAATCAGATTTTTCATACTCACAGTTTGAGGGTTTAAGGGTGGATAGCTCTGAAGTTATTGATGAAGATAATACCCAATTTGCCCCTACTTTTTCTTACTCCAATACTGAGGAAGCTACAAGCCATTCTATGAATAATATTTCATGTGAAGAACCCTACAATAAAAACAACAACAAAAGCAATGGTTTCTTCCTCTCTCTTGGAAGCTGCAGGAGAAAGGGTGCTCCTAAGAGATCACCTCTATCCTAG 711 0.4107 MKGEKVPAWLERLMAETFFGVCGVHINRRKNENNIFCLQCCLAICPHCLPSHPHHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQPYTINGAKVVFLNERVQSRSCKGSSSSNANSCCFCDRILQEPFHFCSLSCKVDNMVCMGESLSSILHGFLESDFSYSQFEGLRVDSSEVIDEDNTQFAPTFSYSNTEEATSHSMNNISCEEPYNKNNNKSNGFFLSLGSCRRKGAPKRSPLS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04266 236 ProSiteProfiles Zinc finger B-box type profile. 21 71 IPR000315 GO:0008270
Trre7g04266 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 235 - -
Trre7g04266 236 Pfam PLATZ transcription factor 61 136 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04266 Trre-Chr7 50638951 50646869 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre7g04266 PLATZ 6.3e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04266 7 50638951 50646869 Trre7g04266 7 50638951 50646869 ECH